RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 RAB20Q9NX57 234 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 CYTH4Q9UIA0 394 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 MAPK8IP1Q9UQF2 711 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 CA5BQ9Y2D0 317 aa11.75□□□□□ -0.53
CTNNA1-205ENST00000517904 O00370 1275 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 RTN2O75298 545 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 IL1BP01584 269 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 CD19P15391 556 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 MAT2AP31153 395 aaKnown RBP11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 GTF2H1P32780 548 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 RGS7P49802 495 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 TBX4P57082 545 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 TMPRSS3P57727 454 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 ECT2LQ008S8 904 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 ZNF211Q13398 564 aaPredicted RBP11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 CDH18Q13634 790 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 DCAF6Q58WW2 860 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 MS4A13Q5J8X5 152 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 CDCP2Q5VXM1 449 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 PMF1Q6P1K2 205 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 IQCHQ86VS3 1027 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 FAM181AQ8N9Y4 354 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 TTC9Q92623 222 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 WBP1Q96G27 269 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 FCRL2Q96LA5 508 aaPredicted RBP11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 ZNF578Q96N58 590 aaPredicted RBP11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 UCKL1Q9NWZ5 548 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 HESX1Q9UBX0 185 aa11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 TPX2Q9ULW0 747 aaKnown RBP11.74□□□□□ -0.53
CTNNA1-205ENST00000517904 PLRG1O43660 514 aaKnown RBP11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 TDRD6O60522 2096 aaKnown RBP11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 DXOO77932 396 aaKnown RBP11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 LUC7L3O95232 432 aaKnown RBP11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 FYNP06241 537 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 PRR29P0C7W0 189 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 GIMD1P0DJR0 217 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 SETSIPP0DME0 302 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 GABREP78334 506 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 E2F1Q01094 437 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 ADAM9Q13443 819 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 CUL2Q13617 745 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 ELAVL3Q14576 367 aaKnown RBP11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 CBWD6Q4V339 395 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 ZCWPW2Q504Y3 356 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 CBWD3Q5JTY5 395 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 CBWD5Q5RIA9 395 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 PRPF39Q86UA1 669 aaKnown RBP11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 UBR7Q8N806 425 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 SLC35F5Q8WV83 523 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 IRGQQ8WZA9 623 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 TFAP2BQ92481 460 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 XPO7Q9UIA9 1087 aaKnown RBP11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 SARDHQ9UL12 918 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 CEP83Q9Y592 693 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 FLNCQ14315 2725 aa11.73□□□□□ -0.53
CTNNA1-205ENST00000517904 COL27A1Q8IZC6 1860 aaPredicted RBP11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 A0A1B0GVL5 298 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 A0A1B0GVM2 712 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 TYW5A2RUC4 315 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 B8ZZF3 427 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 FFAR2O15552 330 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 OPA1O60313 960 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 USP12O75317 370 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 RHOBTB3O94955 611 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 LTFP02788 710 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 MYF5P13349 255 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 KRT10P13645 584 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 C6P13671 934 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 DGKAP23743 735 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 RPL13P26373 211 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 UCNP55089 124 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 DAB2P98082 770 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 OVGP1Q12889 678 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 AGBL4Q5VU57 503 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 BROXQ5VW32 411 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 TMC6Q7Z403 805 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 TRIM69Q86WT6 500 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 OR4C6Q8NH72 309 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 DQX1Q8TE96 717 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 FRS2Q8WU20 508 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 SNRNP27Q8WVK2 155 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 KCNE4Q8WWG9 221 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 SLC39A13Q96H72 371 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 SPAG5Q96R06 1193 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 DDX50Q9BQ39 737 aaKnown RBP11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 ZSWIM1Q9BR11 485 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 KDM4CQ9H3R0 1056 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 CLMPQ9H6B4 373 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 ASCL3Q9NQ33 180 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 DMTF1Q9Y222 760 aa11.72□□□□□ -0.53
CTNNA1-205ENST00000517904 LY6G6EA0A0G2JKS1 128 aa11.71□□□□□ -0.53
CTNNA1-205ENST00000517904 A0A1W2PNU3 283 aaPredicted RBP11.71□□□□□ -0.53
CTNNA1-205ENST00000517904 KLK10O43240 276 aa11.71□□□□□ -0.53
CTNNA1-205ENST00000517904 MAGEC1O60732 1142 aa11.71□□□□□ -0.53
CTNNA1-205ENST00000517904 MOCS3O95396 460 aa11.71□□□□□ -0.53
CTNNA1-205ENST00000517904 MOCS2O96007 188 aaPredicted RBP11.71□□□□□ -0.53
CTNNA1-205ENST00000517904 MYL1P05976 194 aa11.71□□□□□ -0.53
CTNNA1-205ENST00000517904 VDRP11473 427 aa11.71□□□□□ -0.53
CTNNA1-205ENST00000517904 CKMT1AP12532 417 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms