RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 TBC1D3HP0C7X1 549 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 GPR89BP0CG08 455 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 OPN1MW2P0DN77 364 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 OPN1MW3P0DN78 364 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 ATP5JP18859 108 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 KCNA5P22460 613 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 THBS4P35443 961 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 GSTM5P46439 218 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 ATXN3P54252 364 aaPredicted RBP4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 PMS2P54278 862 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 PRKAG1P54619 331 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 CASP9P55211 416 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 FAM3BP58499 235 aaPredicted RBP4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 C21orf58P58505 322 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 EFNB1P98172 346 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 SATB1Q01826 763 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 DUSP2Q05923 314 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 THOC5Q13769 683 aaKnown RBP4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 KCNJ12Q14500 433 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 SKIDA1Q1XH10 827 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 HYAL4Q2M3T9 481 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 MYLK3Q32MK0 819 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 DPCR1Q3MIW9 517 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 WDR72Q3MJ13 1102 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 ZSCAN23Q3MJ62 389 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 ZIK1Q3SY52 487 aaPredicted RBP4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 MFSD14BQ5SR56 506 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 TBC1D3GQ6DHY5 549 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 OTUD7BQ6GQQ9 843 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 ETFRF1Q6IPR1 90 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 TBC1D3CQ6IPX1 549 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 HMBOX1Q6NT76 420 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 ZNF529Q6P280 563 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 CLEC9AQ6UXN8 241 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 SERPINA13PQ6UXR4 307 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 CLEC17AQ6ZS10 378 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 ARHGEF18Q6ZSZ5 1173 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 BEND4Q6ZU67 534 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 OTOP2Q7RTS6 562 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 DZIP1Q86YF9 867 aaKnown RBP4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 ARHGAP12Q8IWW6 846 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 FAM20CQ8IXL6 584 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 KLHL7Q8IXQ5 586 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 TBC1D3Q8IZP1 549 aaPredicted RBP4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 SPARTQ8N0X7 666 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 SHISA5Q8N114 240 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 FSTL5Q8N475 847 aaPredicted RBP4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 MB21D1Q8N884 522 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 IQUBQ8NA54 791 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 CNNM3Q8NE01 707 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 TMIEQ8NEW7 156 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 NLGN4YQ8NFZ3 816 aaPredicted RBP4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 CADM4Q8NFZ8 388 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 OR52K2Q8NGK3 314 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 NEDD1Q8NHV4 660 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 CCDC110Q8TBZ0 833 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 ST7LQ8TDW4 575 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 GIMAP1Q8WWP7 306 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 CORO2AQ92828 525 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 GATA6Q92908 595 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 NKD2Q969F2 451 aaPredicted RBP4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 FAM149B1Q96BN6 582 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 ZDHHC12Q96GR4 267 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 VPS50Q96JG6 964 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 C1orf74Q96LT6 269 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 CFAP57Q96MR6 1250 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 FIZ1Q96SL8 496 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 RUFY1Q96T51 708 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 NDC1Q9BTX1 674 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 HEMGNQ9BXL5 484 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 WDR11Q9BZH6 1224 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 ZNF552Q9H707 407 aaPredicted RBP4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 CARS2Q9HA77 564 aaKnown RBP4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 GBA2Q9HCG7 927 aaPredicted RBP4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 FBRSL1Q9HCM7 1045 aaKnown RBP4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 POLE3Q9NRF9 147 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 LRIT1Q9P2V4 623 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 CDC42EP3Q9UKI2 254 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 TRPC5Q9UL62 973 aaPredicted RBP4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 SLC12A4Q9UP95 1085 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 OSGIN2Q9Y236 505 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 CAPN7Q9Y6W3 813 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 ZMYM3Q14202 1370 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 ATRNL1Q5VV63 1379 aa4.12□□□□□ -1.75
RNU4-60P-201ENST00000517239 A0A0B4J203 849 aa4.11□□□□□ -1.75
RNU4-60P-201ENST00000517239 TCRBV21S2A2A0A5A6 115 aa4.11□□□□□ -1.75
RNU4-60P-201ENST00000517239 A6NL46 340 aa4.11□□□□□ -1.75
RNU4-60P-201ENST00000517239 FAM170BA6NMN3 283 aa4.11□□□□□ -1.75
RNU4-60P-201ENST00000517239 SGK1O00141 431 aa4.11□□□□□ -1.75
RNU4-60P-201ENST00000517239 PER2O15055 1255 aa4.11□□□□□ -1.75
RNU4-60P-201ENST00000517239 DCLK1O15075 740 aa4.11□□□□□ -1.75
RNU4-60P-201ENST00000517239 LDLRAD4O15165 306 aa4.11□□□□□ -1.75
RNU4-60P-201ENST00000517239 KLHL18O94889 574 aa4.11□□□□□ -1.75
RNU4-60P-201ENST00000517239 SLCO2B1O94956 709 aa4.11□□□□□ -1.75
RNU4-60P-201ENST00000517239 SEC31AO94979 1220 aaKnown RBP4.11□□□□□ -1.75
RNU4-60P-201ENST00000517239 IL18BPO95998 194 aa4.11□□□□□ -1.75
RNU4-60P-201ENST00000517239 CHEK2O96017 543 aa4.11□□□□□ -1.75
RNU4-60P-201ENST00000517239 GYPEP15421 78 aa4.11□□□□□ -1.75
RNU4-60P-201ENST00000517239 PDGFRAP16234 1089 aa4.11□□□□□ -1.75
RNU4-60P-201ENST00000517239 TMEM11P17152 192 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms