RNA–Protein interactions for RNA: ENST00000516882.1

SCARNA18.2-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 84 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.2-201ENST00000516882 ARHGEF38Q9NXL2 777 aa7.34□□□□□ -1.23
SCARNA18.2-201ENST00000516882 DLL3Q9NYJ7 618 aa7.34□□□□□ -1.23
SCARNA18.2-201ENST00000516882 USP36Q9P275 1121 aaKnown RBP7.34□□□□□ -1.23
SCARNA18.2-201ENST00000516882 MBD1Q9UIS9 605 aaPredicted RBP7.34□□□□□ -1.23
SCARNA18.2-201ENST00000516882 TMEM59LQ9UK28 342 aa7.34□□□□□ -1.23
SCARNA18.2-201ENST00000516882 VPS28Q9UK41 221 aa7.34□□□□□ -1.23
SCARNA18.2-201ENST00000516882 FARP1Q9Y4F1 1045 aaPredicted RBP7.34□□□□□ -1.23
SCARNA18.2-201ENST00000516882 LAMA1P25391 3075 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 DCHS1Q96JQ0 3298 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 LRRC53A6NM62 1247 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 SIGLEC16A6NMB1 481 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 E9PAM4 449 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 SLC30A4O14863 429 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 GDF9O60383 454 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 RHOCP08134 193 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 SYPP08247 313 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 CHRNB2P17787 502 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 GPD1P21695 349 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 KCNA4P22459 653 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 ITPKAP23677 461 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 OR1E1P30953 314 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 GGCXP38435 758 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 PTGER3P43115 390 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 PLK1P53350 603 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 COPAP53621 1224 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 LIMK1P53667 647 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 ATXN1P54253 815 aaKnown RBP7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 GSCP56915 257 aaPredicted RBP7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 FANCCQ00597 558 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 GFPT1Q06210 699 aaPredicted RBP7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 KLHL30Q0D2K2 578 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 IQCB1Q15051 598 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 HNRNPA1L2Q32P51 320 aaKnown RBP7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 ZSCAN23Q3MJ62 389 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 STPG1Q5TH74 334 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 ACAD10Q6JQN1 1059 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 STRADAQ7RTN6 431 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 DSG4Q86SJ6 1040 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 PHLDB2Q86SQ0 1253 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 SETD3Q86TU7 594 aaPredicted RBP7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 FAM124AQ86V42 546 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 LUZP1Q86V48 1076 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 CIR1Q86X95 450 aaPredicted RBP7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 FAM131BQ86XD5 332 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 APCDD1Q8J025 514 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 DEFB119Q8N690 84 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 EMC1Q8N766 993 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 CADM4Q8NFZ8 388 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 RXFP2Q8WXD0 754 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 SNX19Q92543 992 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 IGSF8Q969P0 613 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 MYEOVQ96EZ4 313 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 ZNF419Q96HQ0 510 aaPredicted RBP7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 VCPIP1Q96JH7 1222 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 RPL10LQ96L21 214 aaKnown RBP7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 CCDC114Q96M63 670 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 OMDQ99983 421 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 FEM1AQ9BSK4 669 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 FUCA2Q9BTY2 467 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 C2orf49Q9BVC5 232 aaPredicted RBP7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 GPR174Q9BXC1 333 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 BTBD1Q9H0C5 482 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 PCED1AQ9H1Q7 454 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 SMOC1Q9H4F8 434 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 CD248Q9HCU0 757 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 TMEM9BQ9NQ34 198 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 PRSS16Q9NQE7 514 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 WSB2Q9NYS7 404 aaPredicted RBP7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 EVLQ9UI08 416 aaPredicted RBP7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 PILRBQ9UKJ0 227 aa7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 INTS6Q9UL03 887 aaKnown RBP7.33□□□□□ -1.24
SCARNA18.2-201ENST00000516882 GOLGA4Q13439 2230 aaKnown RBP7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 ITIH6Q6UXX5 1313 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 ATXN2Q99700 1313 aaKnown RBP7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 PCDH15Q96QU1 1955 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 LNP1A1A4G5 178 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 C2CD4BA6NLJ0 364 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 TMCO5BA8MYB1 307 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 SIN3BO75182 1162 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 RNF8O76064 485 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 ADH1BP00325 375 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 IGLV3-19P01714 112 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 TFE3P19532 575 aaPredicted RBP7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 MZF1P28698 734 aaPredicted RBP7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 ETFBP38117 255 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 PTPN9P43378 593 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 RECQLP46063 649 aaPredicted RBP7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 RPS14P62263 151 aaKnown RBP7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 IRX4P78413 519 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 CCDC15Q0P6D6 951 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 ELAVL3Q14576 367 aaKnown RBP7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 ARID5BQ14865 1188 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 NR1I3Q14994 352 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 C15orf59Q2T9L4 293 aaPredicted RBP7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 C5orf22Q49AR2 442 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 TDRD12Q587J7 1177 aaKnown RBP7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 FIGNQ5HY92 759 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 FAM46CQ5VWP2 391 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 TCEAL6Q6IPX3 200 aa7.32□□□□□ -1.24
SCARNA18.2-201ENST00000516882 CXorf57Q6NSI4 855 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms