RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 POLR2FP61218 127 aaKnown RBP14.07□□□□□ -0.16
TCOF1-215ENST00000515516 CENPCQ03188 943 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 KRT31Q15323 416 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 ST3GAL2Q16842 350 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 SLC25A52Q3SY17 297 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 KIAA0895LQ68EN5 471 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 ADAT2Q7Z6V5 191 aaKnown RBP14.07□□□□□ -0.16
TCOF1-215ENST00000515516 DSG4Q86SJ6 1040 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 NOP9Q86U38 636 aaKnown RBP14.07□□□□□ -0.16
TCOF1-215ENST00000515516 XYLT1Q86Y38 959 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 STK40Q8N2I9 435 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 GPT2Q8TD30 523 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 CPA5Q8WXQ8 436 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 IGSF8Q969P0 613 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 SKA1Q96BD8 255 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 BIRC7Q96CA5 298 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 SPAG5Q96R06 1193 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 NPY6RQ99463 290 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 MUC3BQ9H195 1237 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 GAREM1Q9H706 876 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 FAM207AQ9NSI2 230 aaPredicted RBP14.07□□□□□ -0.16
TCOF1-215ENST00000515516 PIGVQ9NUD9 493 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 ARHGEF38Q9NXL2 777 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 VPS28Q9UK41 221 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 DAAM1Q9Y4D1 1078 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 ITIH6Q6UXX5 1313 aa14.07□□□□□ -0.16
TCOF1-215ENST00000515516 A0A1B0GVT2 93 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 FAM170AA1A519 330 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 SH3BP5O60239 455 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 GFPT2O94808 682 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 TRIM16O95361 564 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 ADCY5O95622 1261 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 MMEP08473 750 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 GOT1P17174 413 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 C5AR1P21730 350 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 CSNK1EP49674 416 aaKnown RBP14.06□□□□□ -0.16
TCOF1-215ENST00000515516 CXCR3P49682 368 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 NUMBP49757 651 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 STK19P49842 368 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-215ENST00000515516 KRT83P78385 493 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 ELAVL3Q14576 367 aaKnown RBP14.06□□□□□ -0.16
TCOF1-215ENST00000515516 SUZ12Q15022 739 aaKnown RBP14.06□□□□□ -0.16
TCOF1-215ENST00000515516 STX1AQ16623 288 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 HLA-BQ31612 363 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 CDKAL1Q5VV42 579 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 FAM46CQ5VWP2 391 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 NAA35Q5VZE5 725 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 CXorf57Q6NSI4 855 aaKnown RBP14.06□□□□□ -0.16
TCOF1-215ENST00000515516 NAXDQ8IW45 347 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 EPS8L1Q8TE68 723 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 SETD7Q8WTS6 366 aaKnown RBP14.06□□□□□ -0.16
TCOF1-215ENST00000515516 PTPRN2Q92932 1015 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 PGAP3Q96FM1 320 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-215ENST00000515516 FAM129BQ96TA1 746 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 TBCBQ99426 244 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 FEM1AQ9BSK4 669 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 NEUROG2Q9H2A3 272 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 TM9SF3Q9HD45 589 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 OSGEPQ9NPF4 335 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 FANCLQ9NW38 375 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 FZD4Q9ULV1 537 aa14.06□□□□□ -0.16
TCOF1-215ENST00000515516 FARP1Q9Y4F1 1045 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-215ENST00000515516 PLXND1Q9Y4D7 1925 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 GJB3O75712 270 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 RHOCP08134 193 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 ZNF883P0CG24 379 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 SOX5P35711 763 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 GGCXP38435 758 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 STAT1P42224 750 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 GRIA4P48058 902 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 VASPP50552 380 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-215ENST00000515516 GALCP54803 685 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 C21orf59P57076 290 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 MYL5Q02045 173 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 SYCP1Q15431 976 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 TRIP6Q15654 476 aaKnown RBP14.05□□□□□ -0.16
TCOF1-215ENST00000515516 NCEH1Q6PIU2 408 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 RBM43Q6ZSC3 357 aaKnown RBP14.05□□□□□ -0.16
TCOF1-215ENST00000515516 C14orf80Q86SX3 495 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 NEK11Q8NG66 645 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 OR2T34Q8NGX1 318 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 OR14C36Q8NHC7 312 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 C1orf216Q8TAB5 229 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 OR8D1Q8WZ84 308 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 NT5C3BQ969T7 300 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 C1orf74Q96LT6 269 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 GANQ9H2C0 597 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 NLRC4Q9NPP4 1024 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 TM7SF3Q9NS93 570 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 TPX2Q9ULW0 747 aaKnown RBP14.05□□□□□ -0.16
TCOF1-215ENST00000515516 NUP205Q92621 2012 aa14.05□□□□□ -0.16
TCOF1-215ENST00000515516 C1QTNF3-AMACRE9PGA6 284 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 MBD3O95983 291 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 TFE3P19532 575 aaPredicted RBP14.04□□□□□ -0.16
TCOF1-215ENST00000515516 KLK7P49862 253 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 COPB1P53618 953 aaKnown RBP14.04□□□□□ -0.16
TCOF1-215ENST00000515516 RACK1P63244 317 aaKnown RBP14.04□□□□□ -0.16
TCOF1-215ENST00000515516 NOMO3P69849 1222 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 CDR2Q01850 454 aa14.04□□□□□ -0.16
TCOF1-215ENST00000515516 DLG2Q15700 870 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms