RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 MAIP1Q8WWC4 291 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 ZFYVE19Q96K21 471 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 LMLNQ96KR4 655 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 XPO6Q96QU8 1125 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 NAP1L3Q99457 506 aaPredicted RBP12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 MAK16Q9BXY0 300 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 FRMD8P1Q9BZ68 369 aaPredicted RBP12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 MAGEH1Q9H213 219 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 MPP6Q9NZW5 540 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 DUSP12Q9UNI6 340 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 SLC27A6Q9Y2P4 619 aa12.31□□□□□ -0.44
PDLIM5-220ENST00000514830 A0A0A0MRY4 1105 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 OTOL1A6NHN0 477 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 APOC4-APOC2K7ER74 178 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 TRDMT1O14717 391 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 APOL1O14791 398 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 NCAM2O15394 837 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 DCXO43602 365 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 TSPAN3O60637 253 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 APOC2P02655 101 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 OR1E1P30953 314 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 GJA4P35212 333 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 ETFBP38117 255 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 ZNF33AQ06730 810 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 ZNF177Q13360 481 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 ZNF211Q13398 564 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 DMC1Q14565 340 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 PARP15Q460N3 678 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 PREPLQ4J6C6 727 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 TMCO3Q6UWJ1 677 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 TPGS1Q6ZTW0 290 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 BZW1Q7L1Q6 419 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 SLC13A5Q86YT5 568 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 CCDC117Q8IWD4 279 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 CFAP52Q8N1V2 620 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 TTC13Q8NBP0 860 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 TTC16Q8NEE8 873 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 KIF18AQ8NI77 898 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 CSGALNACT1Q8TDX6 532 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 NOL6Q9H6R4 1146 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 LRRC19Q9H756 370 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 C8orf33Q9H7E9 229 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 ETNK2Q9NVF9 386 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 KIAA1522Q9P206 1035 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 SORCS3Q9UPU3 1222 aa12.3□□□□□ -0.44
PDLIM5-220ENST00000514830 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 NEDD8-MDP1E9PL57 170 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 CST8O60676 142 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 ZNF189O75820 626 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 ASGR2P07307 311 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 CISD3P0C7P0 127 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 KRT10P13645 584 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 CXCR5P32302 372 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 TNK2Q07912 1038 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 ADCY2Q08462 1091 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 CDH18Q13634 790 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 ANO4Q32M45 955 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 AADACL2Q6P093 401 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 RALGPS2Q86X27 583 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 RFX6Q8HWS3 928 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 CREG2Q8IUH2 290 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 MFN1Q8IWA4 741 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 ARHGAP12Q8IWW6 846 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 UBALD2Q8IYN6 164 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 PHTF2Q8N3S3 785 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 COG1Q8WTW3 980 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 FATE1Q969F0 183 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 CHFRQ96EP1 664 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 ALG14Q96F25 216 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 OLFM3Q96PB7 478 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 HERPUD2Q9BSE4 406 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 BRD8Q9H0E9 1235 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 NDFIP2Q9NV92 336 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 GTSE1Q9NYZ3 720 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 OR51B4Q9Y5P0 310 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 SHROOM3Q8TF72 1996 aa12.29□□□□□ -0.44
PDLIM5-220ENST00000514830 MUC22E2RYF6 1773 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 H0Y626 953 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 PGRMC1O00264 195 aaKnown RBP12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 CEP104O60308 925 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 RAMP2O60895 175 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 TULP3O75386 442 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 FGGP02679 453 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 MX2P20592 715 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 OPRD1P41143 372 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 VASPP50552 380 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 DNA2P51530 1060 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 GNA12Q03113 381 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 GALNT2Q10471 571 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 XRCC4Q13426 336 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 SIX1Q15475 284 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 DRICH1Q6PGQ1 229 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 TFAP2DQ7Z6R9 452 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 CIR1Q86X95 450 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 CARNMT1Q8N4J0 409 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 NPWQ8N729 165 aa12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 ST13P5Q8NFI4 369 aaPredicted RBP12.28□□□□□ -0.44
PDLIM5-220ENST00000514830 WFDC5Q8TCV5 224 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms