RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 GUCA1BQ9UMX6 200 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 SDK1Q7Z5N4 2213 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 MACROD2A1Z1Q3 448 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 RCCD1A6NED2 376 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 BUB1O43683 1085 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 ADH5P11766 374 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 TACR2P21452 398 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 DGKEP52429 567 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 NRG1Q02297 640 aaPredicted RBP20.77■□□□□ 0.92
USP53-208ENST00000514305 ZNF252P-AS1Q0IIN9 211 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 DHCR24Q15392 516 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 ANO4Q32M45 955 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 HS1BP3Q53T59 392 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 MS4A13Q5J8X5 152 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 ZFYVE27Q5T4F4 411 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 HJURPQ8NCD3 748 aaPredicted RBP20.77■□□□□ 0.92
USP53-208ENST00000514305 WBP2Q969T9 261 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 ZC3H10Q96K80 434 aaKnown RBP20.77■□□□□ 0.92
USP53-208ENST00000514305 EPAS1Q99814 870 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 KCNF1Q9H3M0 494 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 MARK1Q9P0L2 795 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 CALCOCO1Q9P1Z2 691 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 EBF1Q9UH73 591 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 FZD10Q9ULW2 581 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 PCDHGA5Q9Y5G8 931 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 HS3ST4Q9Y661 456 aa20.77■□□□□ 0.92
USP53-208ENST00000514305 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.76■□□□□ 0.91
USP53-208ENST00000514305 SCAMP3O14828 347 aaKnown RBP20.76■□□□□ 0.91
USP53-208ENST00000514305 EIF2DP41214 584 aaKnown RBP20.76■□□□□ 0.91
USP53-208ENST00000514305 OXCT1P55809 520 aa20.76■□□□□ 0.91
USP53-208ENST00000514305 LRRC38Q5VT99 294 aa20.76■□□□□ 0.91
USP53-208ENST00000514305 RAP1GAP2Q684P5 730 aa20.76■□□□□ 0.91
USP53-208ENST00000514305 TPGS1Q6ZTW0 290 aa20.76■□□□□ 0.91
USP53-208ENST00000514305 POLNQ7Z5Q5 900 aa20.76■□□□□ 0.91
USP53-208ENST00000514305 RHOT1Q8IXI2 618 aa20.76■□□□□ 0.91
USP53-208ENST00000514305 LGI2Q8N0V4 545 aa20.76■□□□□ 0.91
USP53-208ENST00000514305 USP33Q8TEY7 942 aa20.76■□□□□ 0.91
USP53-208ENST00000514305 PNKPQ96T60 521 aa20.76■□□□□ 0.91
USP53-208ENST00000514305 BBS2Q9BXC9 721 aa20.76■□□□□ 0.91
USP53-208ENST00000514305 ADAM33Q9BZ11 813 aa20.76■□□□□ 0.91
USP53-208ENST00000514305 DDX56Q9NY93 547 aaKnown RBP20.76■□□□□ 0.91
USP53-208ENST00000514305 OR12D3Q9UGF7 316 aa20.76■□□□□ 0.91
USP53-208ENST00000514305 AP4E1Q9UPM8 1137 aa20.76■□□□□ 0.91
USP53-208ENST00000514305 ALG6Q9Y672 507 aa20.76■□□□□ 0.91
USP53-208ENST00000514305 K7EQS6 105 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 GDF9O60383 454 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 BUB1BO60566 1050 aaPredicted RBP20.75■□□□□ 0.91
USP53-208ENST00000514305 RHOBTB1O94844 696 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 APODP05090 189 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 ZNF806P0C7X5 589 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 L1CAMP32004 1257 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 MRPS21P82921 87 aaKnown RBP20.75■□□□□ 0.91
USP53-208ENST00000514305 AUHQ13825 339 aaKnown RBP20.75■□□□□ 0.91
USP53-208ENST00000514305 E2F5Q15329 346 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 SF3A2Q15428 464 aaKnown RBP20.75■□□□□ 0.91
USP53-208ENST00000514305 CCDC6Q16204 474 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 GAB4Q2WGN9 574 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 PLK5Q496M5 336 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 LY6G5CQ5SRR4 150 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 PIK3R6Q5UE93 754 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 IL31Q6EBC2 164 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 RHBDF2Q6PJF5 856 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 RPRD1AQ96P16 312 aaPredicted RBP20.75■□□□□ 0.91
USP53-208ENST00000514305 SLC2A11Q9BYW1 496 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 DHX35Q9H5Z1 703 aaKnown RBP20.75■□□□□ 0.91
USP53-208ENST00000514305 ZWILCHQ9H900 591 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 LZTFL1Q9NQ48 299 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 AMFRQ9UKV5 643 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 MMP17Q9ULZ9 603 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 TFR2Q9UP52 801 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 DUSP10Q9Y6W6 482 aa20.75■□□□□ 0.91
USP53-208ENST00000514305 HOXC11O43248 304 aaPredicted RBP20.74■□□□□ 0.91
USP53-208ENST00000514305 COMTP21964 271 aa20.74■□□□□ 0.91
USP53-208ENST00000514305 MPLP40238 635 aa20.74■□□□□ 0.91
USP53-208ENST00000514305 ARL4AP40617 200 aa20.74■□□□□ 0.91
USP53-208ENST00000514305 USP39Q53GS9 565 aaKnown RBP20.74■□□□□ 0.91
USP53-208ENST00000514305 FAM133BQ5BKY9 247 aaKnown RBP20.74■□□□□ 0.91
USP53-208ENST00000514305 C11orf74Q86VG3 221 aa20.74■□□□□ 0.91
USP53-208ENST00000514305 CCDC185Q8N715 623 aa20.74■□□□□ 0.91
USP53-208ENST00000514305 TRIM58Q8NG06 486 aa20.74■□□□□ 0.91
USP53-208ENST00000514305 DUSP15Q9H1R2 295 aaPredicted RBP20.74■□□□□ 0.91
USP53-208ENST00000514305 CATSPERBQ9H7T0 1116 aa20.74■□□□□ 0.91
USP53-208ENST00000514305 PPARGC1AQ9UBK2 798 aaKnown RBP20.74■□□□□ 0.91
USP53-208ENST00000514305 VANGL2Q9ULK5 521 aa20.74■□□□□ 0.91
USP53-208ENST00000514305 GOLGA6L7A0A1B0GV03 622 aa20.73■□□□□ 0.91
USP53-208ENST00000514305 E9PAM4 449 aa20.73■□□□□ 0.91
USP53-208ENST00000514305 NEDD8-MDP1E9PL57 170 aa20.73■□□□□ 0.91
USP53-208ENST00000514305 DAPK3O43293 454 aa20.73■□□□□ 0.91
USP53-208ENST00000514305 PSTPIP1O43586 416 aa20.73■□□□□ 0.91
USP53-208ENST00000514305 TSPAN3O60637 253 aa20.73■□□□□ 0.91
USP53-208ENST00000514305 SRGAP2O75044 1071 aa20.73■□□□□ 0.91
USP53-208ENST00000514305 CLDN11O75508 207 aa20.73■□□□□ 0.91
USP53-208ENST00000514305 KAT7O95251 611 aa20.73■□□□□ 0.91
USP53-208ENST00000514305 CETN2P41208 172 aa20.73■□□□□ 0.91
USP53-208ENST00000514305 KRT81Q14533 505 aa20.73■□□□□ 0.91
USP53-208ENST00000514305 PDK2Q15119 407 aa20.73■□□□□ 0.91
USP53-208ENST00000514305 PPM1JQ5JR12 505 aa20.73■□□□□ 0.91
USP53-208ENST00000514305 NADSYN1Q6IA69 706 aa20.73■□□□□ 0.91
USP53-208ENST00000514305 FBXL22Q6P050 247 aa20.73■□□□□ 0.91
USP53-208ENST00000514305 PEX26Q7Z412 305 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms