RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 C5orf22Q49AR2 442 aa13.17□□□□□ -0.3
PVT1-203ENST00000513868 TEX44Q53QW1 395 aa13.17□□□□□ -0.3
PVT1-203ENST00000513868 NUGGCQ68CJ6 796 aa13.17□□□□□ -0.3
PVT1-203ENST00000513868 PID1Q7Z2X4 250 aa13.17□□□□□ -0.3
PVT1-203ENST00000513868 SPRED2Q7Z698 418 aa13.17□□□□□ -0.3
PVT1-203ENST00000513868 CROCCP2Q86T23 111 aa13.17□□□□□ -0.3
PVT1-203ENST00000513868 TADA2BQ86TJ2 420 aa13.17□□□□□ -0.3
PVT1-203ENST00000513868 UMODL1-AS1Q8N2C9 162 aa13.17□□□□□ -0.3
PVT1-203ENST00000513868 CNTD1Q8N815 330 aa13.17□□□□□ -0.3
PVT1-203ENST00000513868 ZNF419Q96HQ0 510 aaPredicted RBP13.17□□□□□ -0.3
PVT1-203ENST00000513868 KLHL5Q96PQ7 755 aa13.17□□□□□ -0.3
PVT1-203ENST00000513868 FERMT1Q9BQL6 677 aa13.17□□□□□ -0.3
PVT1-203ENST00000513868 ZYG11BQ9C0D3 744 aa13.17□□□□□ -0.3
PVT1-203ENST00000513868 ALG13Q9NP73 1137 aaKnown RBP13.17□□□□□ -0.3
PVT1-203ENST00000513868 EIF2B3Q9NR50 452 aaKnown RBP13.17□□□□□ -0.3
PVT1-203ENST00000513868 BCCIPQ9P287 314 aaKnown RBP eCLIP13.17□□□□□ -0.3
PVT1-203ENST00000513868 IRAK3Q9Y616 596 aa13.17□□□□□ -0.3
PVT1-203ENST00000513868 DFFAO00273 331 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 STC2O76061 302 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 KLKB1P03952 638 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 SLC6A4P31645 630 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 PPP3CCP48454 512 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 IFI35P80217 286 aaPredicted RBP13.16□□□□□ -0.3
PVT1-203ENST00000513868 COG7P83436 770 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 CDK16Q00536 496 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 CCDC38Q502W7 563 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 FAM133BQ5BKY9 247 aaKnown RBP13.16□□□□□ -0.3
PVT1-203ENST00000513868 ACBD5Q5T8D3 534 aaPredicted RBP13.16□□□□□ -0.3
PVT1-203ENST00000513868 LRRC31Q6UY01 552 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 TMC7Q7Z402 723 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 PDCD7Q8N8D1 485 aaKnown RBP13.16□□□□□ -0.3
PVT1-203ENST00000513868 WBP2Q969T9 261 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 SIGLEC10Q96LC7 697 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 TEKT5Q96M29 485 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 VAT1Q99536 393 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 KLF16Q9BXK1 252 aaPredicted RBP13.16□□□□□ -0.3
PVT1-203ENST00000513868 LRRC3Q9BY71 257 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 PLAC1Q9HBJ0 212 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 GKN1Q9NS71 199 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 KLHL8Q9P2G9 620 aaPredicted RBP13.16□□□□□ -0.3
PVT1-203ENST00000513868 CTNNAL1Q9UBT7 734 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 RABGEF1Q9UJ41 708 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 TRHDEQ9UKU6 1024 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 CHMP2BQ9UQN3 213 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 LZTS1Q9Y250 596 aa13.16□□□□□ -0.3
PVT1-203ENST00000513868 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.15□□□□□ -0.3
PVT1-203ENST00000513868 HIDE1A8MVS5 230 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 E7EVH7 732 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 CACNG3O60359 315 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 ACSL4O60488 711 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 ARHGEF15O94989 841 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 TSHRP16473 764 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 NR1D1P20393 614 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 TACR2P21452 398 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 PAPOLAP51003 745 aaKnown RBP13.15□□□□□ -0.3
PVT1-203ENST00000513868 NDST2P52849 883 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 MAGOHP61326 146 aaKnown RBP13.15□□□□□ -0.3
PVT1-203ENST00000513868 SKOR1P84550 965 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 MTA1Q13330 715 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 TAF12Q16514 161 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 DNAJC21Q5F1R6 531 aaKnown RBP13.15□□□□□ -0.3
PVT1-203ENST00000513868 KDM7AQ6ZMT4 941 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 CAPN12Q6ZSI9 719 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 C3orf62Q6ZUJ4 267 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 TFAP2DQ7Z6R9 452 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 ATPAF2Q8N5M1 289 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 ATP11CQ8NB49 1132 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 SPPL3Q8TCT6 385 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 ZFRQ96KR1 1074 aaKnown RBP13.15□□□□□ -0.3
PVT1-203ENST00000513868 AGAP3Q96P47 875 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 IL12RB2Q99665 862 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 TCF25Q9BQ70 676 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 GBA3Q9H227 469 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 VPS37BQ9H9H4 285 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 UXTQ9UBK9 157 aaPredicted RBP13.15□□□□□ -0.3
PVT1-203ENST00000513868 TRANK1O15050 2925 aa13.15□□□□□ -0.3
PVT1-203ENST00000513868 LINC01553A4QN01 128 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 C2orf71A6NGG8 1288 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 MATN3O15232 486 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 RGS16O15492 202 aaPredicted RBP13.15□□□□□ -0.31
PVT1-203ENST00000513868 PEX11BO96011 259 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 AGTP01019 485 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 JCHAINP01591 159 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 CCNB1P14635 433 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 CA8P35219 290 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 CTNNB1P35222 781 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 SKIDA1Q1XH10 827 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 KCTD11Q693B1 232 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 ITIH5Q86UX2 942 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 CHSY1Q86X52 802 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 CIR1Q86X95 450 aaPredicted RBP13.15□□□□□ -0.31
PVT1-203ENST00000513868 LRRC49Q8IUZ0 686 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 KLHDC8BQ8IXV7 354 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 CYP4X1Q8N118 509 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 PIAS4Q8N2W9 510 aaPredicted RBP13.15□□□□□ -0.31
PVT1-203ENST00000513868 MPP5Q8N3R9 675 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 MRPL43Q8N983 215 aaKnown RBP13.15□□□□□ -0.31
PVT1-203ENST00000513868 AZIN2Q96A70 460 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 PLD4Q96BZ4 506 aa13.15□□□□□ -0.31
PVT1-203ENST00000513868 SLC22A12Q96S37 553 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms