RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 TRIM38O00635 465 aa14.41□□□□□ -0.1
SPCS3-204ENST00000513139 MPOP05164 745 aa14.41□□□□□ -0.1
SPCS3-204ENST00000513139 TBC1D3HP0C7X1 549 aa14.41□□□□□ -0.1
SPCS3-204ENST00000513139 SLC6A4P31645 630 aa14.41□□□□□ -0.1
SPCS3-204ENST00000513139 GCLMP48507 274 aa14.41□□□□□ -0.1
SPCS3-204ENST00000513139 GABREP78334 506 aa14.41□□□□□ -0.1
SPCS3-204ENST00000513139 PPP3CAQ08209 521 aa14.41□□□□□ -0.1
SPCS3-204ENST00000513139 KMT5BQ4FZB7 885 aa14.41□□□□□ -0.1
SPCS3-204ENST00000513139 HS1BP3Q53T59 392 aa14.41□□□□□ -0.1
SPCS3-204ENST00000513139 TBC1D3GQ6DHY5 549 aa14.41□□□□□ -0.1
SPCS3-204ENST00000513139 TBC1D3CQ6IPX1 549 aa14.41□□□□□ -0.1
SPCS3-204ENST00000513139 IGF2-ASQ6U949 168 aa14.41□□□□□ -0.1
SPCS3-204ENST00000513139 INTS8Q75QN2 995 aaKnown RBP14.41□□□□□ -0.1
SPCS3-204ENST00000513139 TBC1D3Q8IZP1 549 aaPredicted RBP14.41□□□□□ -0.1
SPCS3-204ENST00000513139 SLC25A45Q8N413 288 aa14.41□□□□□ -0.1
SPCS3-204ENST00000513139 OR4C6Q8NH72 309 aa14.41□□□□□ -0.1
SPCS3-204ENST00000513139 NDRG1Q92597 394 aaKnown RBP14.41□□□□□ -0.1
SPCS3-204ENST00000513139 EDEM1Q92611 657 aa14.41□□□□□ -0.1
SPCS3-204ENST00000513139 DDX50Q9BQ39 737 aaKnown RBP14.41□□□□□ -0.1
SPCS3-204ENST00000513139 CISHQ9NSE2 258 aa14.41□□□□□ -0.1
SPCS3-204ENST00000513139 AHCTF1Q8WYP5 2266 aa14.41□□□□□ -0.1
SPCS3-204ENST00000513139 FLNCQ14315 2725 aa14.41□□□□□ -0.1
SPCS3-204ENST00000513139 TLN1Q9Y490 2541 aaKnown RBP14.41□□□□□ -0.1
SPCS3-204ENST00000513139 COL27A1Q8IZC6 1860 aaPredicted RBP14.4□□□□□ -0.1
SPCS3-204ENST00000513139 TYW5A2RUC4 315 aaKnown RBP14.4□□□□□ -0.1
SPCS3-204ENST00000513139 TTC34A8MYJ7 566 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 KLK10O43240 276 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 SLC7A4O43246 635 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 MSI1O43347 362 aaKnown RBP14.4□□□□□ -0.1
SPCS3-204ENST00000513139 KLRC4O43908 158 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 LZTS3O60299 673 aaPredicted RBP14.4□□□□□ -0.1
SPCS3-204ENST00000513139 OPA1O60313 960 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 ACSL4O60488 711 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 USP12O75317 370 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 GP1BAP07359 652 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 CKMT1AP12532 417 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 AFMP43652 599 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 PSMD8P48556 350 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 CSRP3P50461 194 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 PPP2CBP62714 309 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 PPP2CAP67775 309 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 DAB2P98082 770 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 ADIGQ0VDE8 80 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 ELAVL3Q14576 367 aaKnown RBP14.4□□□□□ -0.1
SPCS3-204ENST00000513139 STAT4Q14765 748 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 CCDC117Q8IWD4 279 aaPredicted RBP14.4□□□□□ -0.1
SPCS3-204ENST00000513139 KCTD13Q8WZ19 329 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 TMEM8AQ9HCN3 771 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 ASCL3Q9NQ33 180 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 CNGB3Q9NQW8 809 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 THSD1Q9NS62 852 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 EXOC1Q9NV70 894 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 CYTH4Q9UIA0 394 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 TRAF3IP3Q9Y228 551 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 RP1P56715 2156 aa14.4□□□□□ -0.1
SPCS3-204ENST00000513139 DOPEY2Q9Y3R5 2298 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 GOLGA6L7A0A1B0GV03 622 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 TULP2O00295 520 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 SLC28A2O43868 658 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 RNGTTO60942 597 aaKnown RBP14.39□□□□□ -0.11
SPCS3-204ENST00000513139 SDC3O75056 442 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 MOCS3O95396 460 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 IL1BP01584 269 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 DGKAP23743 735 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 MZF1P28698 734 aaPredicted RBP14.39□□□□□ -0.11
SPCS3-204ENST00000513139 GTF2H1P32780 548 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 DRD3P35462 400 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 MCCD1P59942 119 aaPredicted RBP14.39□□□□□ -0.11
SPCS3-204ENST00000513139 ECT2LQ008S8 904 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 BST2Q10589 180 aaKnown RBP14.39□□□□□ -0.11
SPCS3-204ENST00000513139 CDH18Q13634 790 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 NFIL3Q16649 462 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 PITRM1Q5JRX3 1037 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 RESP18Q5W5W9 173 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 TRIM69Q86WT6 500 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 SIX6OS1Q8N1H7 587 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 STK40Q8N2I9 435 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 PTPRN2Q92932 1015 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 CCDC97Q96F63 343 aaPredicted RBP14.39□□□□□ -0.11
SPCS3-204ENST00000513139 USP29Q9HBJ7 922 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 STIM2Q9P246 746 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 HESX1Q9UBX0 185 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 TSPAN16Q9UKR8 245 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 TRPM6Q9BX84 2022 aa14.39□□□□□ -0.11
SPCS3-204ENST00000513139 A0A1B0GVL5 298 aa14.38□□□□□ -0.11
SPCS3-204ENST00000513139 PRAMEF26H0Y7S4 382 aa14.38□□□□□ -0.11
SPCS3-204ENST00000513139 K7ENP7 123 aa14.38□□□□□ -0.11
SPCS3-204ENST00000513139 PLRG1O43660 514 aaKnown RBP14.38□□□□□ -0.11
SPCS3-204ENST00000513139 CALUO43852 315 aaPredicted RBP14.38□□□□□ -0.11
SPCS3-204ENST00000513139 CSO75390 466 aaKnown RBP14.38□□□□□ -0.11
SPCS3-204ENST00000513139 TRIM49P0CI25 452 aa14.38□□□□□ -0.11
SPCS3-204ENST00000513139 TRIM49CP0CI26 452 aa14.38□□□□□ -0.11
SPCS3-204ENST00000513139 KRT13P13646 458 aa14.38□□□□□ -0.11
SPCS3-204ENST00000513139 DAOAP59103 153 aa14.38□□□□□ -0.11
SPCS3-204ENST00000513139 RPS24P62847 133 aaKnown RBP14.38□□□□□ -0.11
SPCS3-204ENST00000513139 GOLGA7BQ2TAP0 167 aa14.38□□□□□ -0.11
SPCS3-204ENST00000513139 SETMARQ53H47 684 aaPredicted RBP14.38□□□□□ -0.11
SPCS3-204ENST00000513139 RNF219Q5W0B1 726 aaPredicted RBP14.38□□□□□ -0.11
SPCS3-204ENST00000513139 KRT39Q6A163 491 aa14.38□□□□□ -0.11
SPCS3-204ENST00000513139 NADSYN1Q6IA69 706 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms