RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 GRAMD4Q6IC98 578 aa9.9□□□□□ -0.82
TRIO-220ENST00000512979 TPGS1Q6ZTW0 290 aa9.9□□□□□ -0.82
TRIO-220ENST00000512979 HTR3DQ70Z44 454 aa9.9□□□□□ -0.82
TRIO-220ENST00000512979 TRMT11Q7Z4G4 463 aaKnown RBP9.9□□□□□ -0.82
TRIO-220ENST00000512979 PHACTR4Q8IZ21 702 aa9.9□□□□□ -0.82
TRIO-220ENST00000512979 ABCA7Q8IZY2 2146 aa9.9□□□□□ -0.82
TRIO-220ENST00000512979 ZNF513Q8N8E2 541 aaPredicted RBP9.9□□□□□ -0.82
TRIO-220ENST00000512979 TERB1Q8NA31 727 aa9.9□□□□□ -0.82
TRIO-220ENST00000512979 RLN3Q8WXF3 142 aa9.9□□□□□ -0.82
TRIO-220ENST00000512979 SEMA4DQ92854 862 aa9.9□□□□□ -0.82
TRIO-220ENST00000512979 BTBD6Q96KE9 485 aa9.9□□□□□ -0.82
TRIO-220ENST00000512979 HEXIM2Q96MH2 286 aaKnown RBP9.9□□□□□ -0.82
TRIO-220ENST00000512979 XPO6Q96QU8 1125 aaKnown RBP9.9□□□□□ -0.82
TRIO-220ENST00000512979 EDEM2Q9BV94 578 aa9.9□□□□□ -0.82
TRIO-220ENST00000512979 DUSP16Q9BY84 665 aa9.9□□□□□ -0.82
TRIO-220ENST00000512979 DNAJC17Q9NVM6 304 aaKnown RBP9.9□□□□□ -0.82
TRIO-220ENST00000512979 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.9□□□□□ -0.82
TRIO-220ENST00000512979 NUDT5Q9UKK9 219 aa9.9□□□□□ -0.82
TRIO-220ENST00000512979 PLAAQ9Y263 795 aa9.9□□□□□ -0.82
TRIO-220ENST00000512979 KIAA1549LQ6ZVL6 1849 aa9.9□□□□□ -0.82
TRIO-220ENST00000512979 CNOT1A5YKK6 2376 aaKnown RBP9.9□□□□□ -0.82
TRIO-220ENST00000512979 TMPRSS2O15393 492 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 STX10O60499 249 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 DEAF1O75398 565 aaPredicted RBP9.89□□□□□ -0.83
TRIO-220ENST00000512979 VSIG8P0DPA2 414 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 RALAP11233 206 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 TYRP14679 529 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 P2RY2P41231 377 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 DCAF17Q5H9S7 520 aaPredicted RBP9.89□□□□□ -0.83
TRIO-220ENST00000512979 EXOSC6Q5RKV6 272 aaKnown RBP9.89□□□□□ -0.83
TRIO-220ENST00000512979 TCERG1LQ5VWI1 586 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 KLHDC10Q6PID8 442 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 Q6ZNB5 142 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 CCDC186Q7Z3E2 898 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 SCD5Q86SK9 330 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 TADA2BQ86TJ2 420 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 MIB1Q86YT6 1006 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 TTC39CQ8N584 583 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 FBXL13Q8NEE6 735 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 OLIG1Q8TAK6 271 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 UBASH3BQ8TF42 649 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 TSG101Q99816 390 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 BBS2Q9BXC9 721 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 CISHQ9NSE2 258 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 RMND1Q9NWS8 449 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 RAB20Q9NX57 234 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 WDR35Q9P2L0 1181 aa9.89□□□□□ -0.83
TRIO-220ENST00000512979 MYH10P35580 1976 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 RGS13O14921 159 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 CACNG3O60359 315 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 NID1P14543 1247 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 HOXB2P14652 356 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 NTF4P34130 210 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 CCNFP41002 786 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 WASP42768 502 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 PRCPP42785 496 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 RAD23BP54727 409 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 BYSLQ13895 437 aaKnown RBP9.88□□□□□ -0.83
TRIO-220ENST00000512979 BBS9Q3SYG4 887 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 CBWD6Q4V339 395 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 CBWD3Q5JTY5 395 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 CBWD5Q5RIA9 395 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 SLC6A19Q695T7 634 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 ARMCX6Q7L4S7 300 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 LPCAT2Q7L5N7 544 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 MRPL41Q8IXM3 137 aaKnown RBP9.88□□□□□ -0.83
TRIO-220ENST00000512979 FMR1NBQ8N0W7 255 aaPredicted RBP9.88□□□□□ -0.83
TRIO-220ENST00000512979 FRMD1Q8N878 549 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 SLC4A11Q8NBS3 891 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 PIGKQ92643 395 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 TMEM176AQ96HP8 235 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 FAXDC2Q96IV6 333 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 DHRS1Q96LJ7 313 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 SLC6A18Q96N87 628 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 CDK5RAP1Q96SZ6 601 aaKnown RBP9.88□□□□□ -0.83
TRIO-220ENST00000512979 LSM14BQ9BX40 385 aaKnown RBP9.88□□□□□ -0.83
TRIO-220ENST00000512979 FBRSQ9HAH7 460 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 DDX56Q9NY93 547 aaKnown RBP9.88□□□□□ -0.83
TRIO-220ENST00000512979 CLIC5Q9NZA1 410 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 CRIM1Q9NZV1 1036 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 HOOK1Q9UJC3 728 aaKnown RBP9.88□□□□□ -0.83
TRIO-220ENST00000512979 RASAL2Q9UJF2 1139 aa9.88□□□□□ -0.83
TRIO-220ENST00000512979 MYO18AQ92614 2054 aaKnown RBP9.87□□□□□ -0.83
TRIO-220ENST00000512979 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.87□□□□□ -0.83
TRIO-220ENST00000512979 LNP1A1A4G5 178 aa9.87□□□□□ -0.83
TRIO-220ENST00000512979 C4orf47A7E2U8 309 aa9.87□□□□□ -0.83
TRIO-220ENST00000512979 PATE3B3GLJ2 98 aa9.87□□□□□ -0.83
TRIO-220ENST00000512979 AGRPO00253 132 aa9.87□□□□□ -0.83
TRIO-220ENST00000512979 SLC16A3O15427 465 aaKnown RBP9.87□□□□□ -0.83
TRIO-220ENST00000512979 STC2O76061 302 aa9.87□□□□□ -0.83
TRIO-220ENST00000512979 SMC2O95347 1197 aa9.87□□□□□ -0.83
TRIO-220ENST00000512979 TP53P04637 393 aaPredicted RBP9.87□□□□□ -0.83
TRIO-220ENST00000512979 HMBSP08397 361 aa9.87□□□□□ -0.83
TRIO-220ENST00000512979 NTSR1P30989 418 aa9.87□□□□□ -0.83
TRIO-220ENST00000512979 PMS1P54277 932 aaKnown RBP9.87□□□□□ -0.83
TRIO-220ENST00000512979 SLC8A3P57103 927 aa9.87□□□□□ -0.83
TRIO-220ENST00000512979 NUCB2P80303 420 aa9.87□□□□□ -0.83
TRIO-220ENST00000512979 FKBP3Q00688 224 aaKnown RBP9.87□□□□□ -0.83
TRIO-220ENST00000512979 EFEMP1Q12805 493 aa9.87□□□□□ -0.83
TRIO-220ENST00000512979 NKG7Q16617 165 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms