RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 HSFY1Q96LI6 401 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 TSEN34Q9BSV6 310 aaKnown RBP12.7□□□□□ -0.38
COL11A1-210ENST00000512756 CD3EAPO15446 510 aaKnown RBP12.7□□□□□ -0.38
COL11A1-210ENST00000512756 TBC1D12O60347 775 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 NPM3O75607 178 aaKnown RBP12.7□□□□□ -0.38
COL11A1-210ENST00000512756 ANXA6P08133 673 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 TAL1P17542 331 aaPredicted RBP12.7□□□□□ -0.38
COL11A1-210ENST00000512756 AKAP5P24588 427 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 EPS8Q12929 822 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 PDK4Q16654 411 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 DACT2Q5SW24 774 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 OTUD3Q5T2D3 398 aaPredicted RBP12.7□□□□□ -0.38
COL11A1-210ENST00000512756 NEPROQ6NW34 567 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 FOXR1Q6PIV2 292 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 POLNQ7Z5Q5 900 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 NET1Q7Z628 596 aaPredicted RBP12.7□□□□□ -0.38
COL11A1-210ENST00000512756 NECAB2Q7Z6G3 386 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 TFAP2DQ7Z6R9 452 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 C11orf74Q86VG3 221 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 EXOC3L1Q86VI1 746 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 PRELID2Q8N945 189 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 KAT5Q92993 513 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 RPL26L1Q9UNX3 145 aaKnown RBP12.7□□□□□ -0.38
COL11A1-210ENST00000512756 TNPO3Q9Y5L0 923 aaKnown RBP12.7□□□□□ -0.38
COL11A1-210ENST00000512756 TIMM13Q9Y5L4 95 aaPredicted RBP12.7□□□□□ -0.38
COL11A1-210ENST00000512756 NEK3P51956 506 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 DLG4P78352 724 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 PPIDQ08752 370 aaKnown RBP12.7□□□□□ -0.38
COL11A1-210ENST00000512756 CES3Q6UWW8 571 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 TMEM132CQ8N3T6 1108 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 RORBQ92753 470 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 TMEM159Q96B96 161 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 RNF145Q96MT1 663 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 UNKQ9C0B0 810 aaKnown RBP12.7□□□□□ -0.38
COL11A1-210ENST00000512756 ZCCHC2Q9C0B9 1178 aaKnown RBP12.7□□□□□ -0.38
COL11A1-210ENST00000512756 CCDC167Q9P0B6 97 aa12.7□□□□□ -0.38
COL11A1-210ENST00000512756 A0A0B4J269 797 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 RGS14O43566 566 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 ZSCAN5DPP0CG00 497 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 TTKP33981 857 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 STK32CQ86UX6 486 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 VSIG10LQ86VR7 867 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 PRCCQ92733 491 aaPredicted RBP12.69□□□□□ -0.38
COL11A1-210ENST00000512756 LENG9Q96B70 501 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 REPS1Q96D71 796 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 ADPRHL2Q9NX46 363 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.69□□□□□ -0.38
COL11A1-210ENST00000512756 LIMD1Q9UGP4 676 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 ARHGAP23Q9P227 1491 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 SEC22BO75396 215 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 OR56A5P0C7T3 313 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 CENPAP49450 140 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 SERPINH1P50454 418 aaKnown RBP12.69□□□□□ -0.38
COL11A1-210ENST00000512756 BMT2Q1RMZ1 405 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 GLT6D1Q7Z4J2 308 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 FAM228AQ86W67 206 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 ZCCHC7Q8N3Z6 543 aaKnown RBP12.69□□□□□ -0.38
COL11A1-210ENST00000512756 C10orf53Q8N6V4 93 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 CERKQ8TCT0 537 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 SPPL2AQ8TCT8 520 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 DUSP12Q9UNI6 340 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 PCDHA11Q9Y5I1 949 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 PREX1Q8TCU6 1659 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 TPP1O14773 563 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 GJB6O95452 261 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 DARSP14868 501 aaKnown RBP12.69□□□□□ -0.38
COL11A1-210ENST00000512756 SKIV2LQ15477 1246 aaKnown RBP12.69□□□□□ -0.38
COL11A1-210ENST00000512756 CHMP1BQ7LBR1 199 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 ZDHHC13Q8IUH4 622 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 MIEF2Q96C03 454 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 TKTL2Q9H0I9 626 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 PIF1Q9H611 641 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 TMCO1Q9UM00 188 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 TNFSF13BQ9Y275 285 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 IFRD1O00458 451 aaPredicted RBP12.69□□□□□ -0.38
COL11A1-210ENST00000512756 KPNA4O00629 521 aaPredicted RBP12.69□□□□□ -0.38
COL11A1-210ENST00000512756 FSCN2O14926 492 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 DYRK3O43781 588 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 MED26O95402 600 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 STAU1O95793 577 aaKnown RBP12.69□□□□□ -0.38
COL11A1-210ENST00000512756 SHBGP04278 402 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 PABPC1P11940 636 aaKnown RBP12.69□□□□□ -0.38
COL11A1-210ENST00000512756 PIK3R1P27986 724 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 HOXA10P31260 410 aaPredicted RBP12.69□□□□□ -0.38
COL11A1-210ENST00000512756 BBS12Q6ZW61 710 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 OPTNQ96CV9 577 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 MPP4Q96JB8 637 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 POLR1EQ9GZS1 481 aaKnown RBP12.69□□□□□ -0.38
COL11A1-210ENST00000512756 ARMC7Q9H6L4 198 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 ABCC13Q9NSE7 274 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 SH3BP4Q9P0V3 963 aa12.69□□□□□ -0.38
COL11A1-210ENST00000512756 H3BMM5 538 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 PSMD12O00232 456 aaPredicted RBP12.68□□□□□ -0.38
COL11A1-210ENST00000512756 POMCP01189 267 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 HSMCR30P0CW71 290 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 LBPP18428 481 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 RPL22P35268 128 aaKnown RBP12.68□□□□□ -0.38
COL11A1-210ENST00000512756 MMP13P45452 471 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 MFSD10Q14728 455 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 ZNF544Q6NX49 715 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms