RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 SAP25Q8TEE9 199 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 PTPRN2Q92932 1015 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 FAM149B1Q96BN6 582 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 PRICKLE1Q96MT3 831 aaPredicted RBP12.98□□□□□ -0.33
VEGFA-216ENST00000512683 KREMEN1Q96MU8 473 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 SPAG5Q96R06 1193 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 NUCKS1Q9H1E3 243 aaKnown RBP12.98□□□□□ -0.33
VEGFA-216ENST00000512683 ASNSD1Q9NWL6 643 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 CHMP5Q9NZZ3 219 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 SLCO3A1Q9UIG8 710 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 DMTF1Q9Y222 760 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 CEP83Q9Y592 693 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 CABIN1Q9Y6J0 2220 aa12.98□□□□□ -0.33
VEGFA-216ENST00000512683 FAM47DPA6NHR8 397 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 F5H5T6 163 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 KCNK3O14649 394 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 ENC1O14682 589 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 ALOX15BO15296 676 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 RNGTTO60942 597 aaKnown RBP12.97□□□□□ -0.33
VEGFA-216ENST00000512683 TRUB2O95900 331 aaKnown RBP12.97□□□□□ -0.33
VEGFA-216ENST00000512683 HOXB3P14651 431 aaPredicted RBP12.97□□□□□ -0.33
VEGFA-216ENST00000512683 JUPP14923 745 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 TACR2P21452 398 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 CCR1P32246 355 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 CDK17Q00537 523 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 COL28A1Q2UY09 1125 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 KCNT1Q5JUK3 1230 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 EFHC1Q5JVL4 640 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 RABGAP1LQ5R372 815 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 C6orf118Q5T5N4 469 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 NEK5Q6P3R8 708 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 C19orf48Q6RUI8 117 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 TAC4Q86UU9 113 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 IRF2BP1Q8IU81 584 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 LGI2Q8N0V4 545 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 OR14C36Q8NHC7 312 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 CLEC4CQ8WTT0 213 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 ZNF606Q8WXB4 792 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 NRSN2Q9GZP1 204 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 ST7Q9NRC1 585 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 AASDHPPTQ9NRN7 309 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 RAXQ9Y2V3 346 aa12.97□□□□□ -0.33
VEGFA-216ENST00000512683 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.97□□□□□ -0.33
VEGFA-216ENST00000512683 CKAP5Q14008 2032 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 KNTC1P50748 2209 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 TBC1D3DA0A087WVF3 549 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 TBC1D3IA0A087WXS9 549 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 TBC1D3EA0A087X179 549 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 TBC1D3KA0A087X1G2 549 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 A0A1B0GVM2 712 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 TBC1D3FA6NER0 549 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-216ENST00000512683 TCAF2A6NFQ2 919 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 GOLGA8CPA6NN73 597 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 TTC34A8MYJ7 566 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 TBC1D3LB9A6J9 549 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 PIK3R2O00459 728 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 ATP9BO43861 1147 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 AFPP02771 609 aaKnown RBP12.96□□□□□ -0.33
VEGFA-216ENST00000512683 TBC1D3HP0C7X1 549 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 MZF1P28698 734 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-216ENST00000512683 ADPRHP54922 357 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 NXPH1P58417 271 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 KCNJ12Q14500 433 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 SOWAHCQ53LP3 525 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-216ENST00000512683 ZC3H12AQ5D1E8 599 aaKnown RBP12.96□□□□□ -0.33
VEGFA-216ENST00000512683 SYPL2Q5VXT5 272 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 TBC1D3GQ6DHY5 549 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 TBC1D3CQ6IPX1 549 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 NAPEPLDQ6IQ20 393 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 DHRS13Q6UX07 377 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 CHSY1Q86X52 802 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 TBC1D3Q8IZP1 549 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-216ENST00000512683 CFAP52Q8N1V2 620 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 LSM14AQ8ND56 463 aaKnown RBP12.96□□□□□ -0.33
VEGFA-216ENST00000512683 FRS2Q8WU20 508 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 HNRNPLLQ8WVV9 542 aaKnown RBP12.96□□□□□ -0.33
VEGFA-216ENST00000512683 TSC1Q92574 1164 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 SERAC1Q96JX3 654 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 CNDP2Q96KP4 475 aaKnown RBP12.96□□□□□ -0.33
VEGFA-216ENST00000512683 SLC6A18Q96N87 628 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 PRMT1Q99873 361 aaKnown RBP12.96□□□□□ -0.33
VEGFA-216ENST00000512683 INTS2Q9H0H0 1204 aaKnown RBP12.96□□□□□ -0.33
VEGFA-216ENST00000512683 MTG2Q9H4K7 406 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 EBF2Q9HAK2 575 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 SERGEFQ9UGK8 458 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 RWDD2AQ9UIY3 292 aa12.96□□□□□ -0.33
VEGFA-216ENST00000512683 URB1O60287 2271 aaKnown RBP12.95□□□□□ -0.34
VEGFA-216ENST00000512683 LAMA5O15230 3695 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 MCF2LO15068 1137 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 CLDN11O75508 207 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 RFPL3O75679 317 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 MOCS2O96007 188 aaPredicted RBP12.95□□□□□ -0.34
VEGFA-216ENST00000512683 IL1BP01584 269 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 WNT1P04628 370 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 E2F1Q01094 437 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 STAT4Q14765 748 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 RTP5Q14D33 572 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 SHBQ15464 509 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 RAP1GAP2Q684P5 730 aa12.95□□□□□ -0.34
VEGFA-216ENST00000512683 MMS22LQ6ZRQ5 1243 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms