RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 SGTAO43765 313 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 TBL1XO60907 577 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 PCCBP05166 539 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 SPATA31D3P0C874 917 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 SLC1A1P43005 524 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 NDUFA5Q16718 116 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 MTFR2Q6P444 385 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 MFSD7Q6UXD7 560 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 SPATA31D4Q6ZUB0 917 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 OXR1Q8N573 874 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 CPA5Q8WXQ8 436 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 FAM120BQ96EK7 910 aaKnown RBP9.09□□□□□ -0.95
VCAN-208ENST00000512590 FUBP3Q96I24 572 aaKnown RBP eCLIP9.09□□□□□ -0.95
VCAN-208ENST00000512590 CPVLQ9H3G5 476 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 DSN1Q9H410 356 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 OGFRQ9NZT2 677 aa9.09□□□□□ -0.95
VCAN-208ENST00000512590 DRG1Q9Y295 367 aaKnown RBP9.09□□□□□ -0.95
VCAN-208ENST00000512590 NEDD8-MDP1E9PL57 170 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 CYP26A1O43174 497 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 FAM20BO75063 409 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 STX11O75558 287 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 EPHX1P07099 455 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 KLRC1P26715 233 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 ARRB1P49407 418 aaPredicted RBP9.09□□□□□ -0.96
VCAN-208ENST00000512590 CLCN3P51790 818 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 BEX3Q00994 111 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 GPM6BQ13491 265 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 CBX2Q14781 532 aaPredicted RBP9.09□□□□□ -0.96
VCAN-208ENST00000512590 PTGES3Q15185 160 aaKnown RBP9.09□□□□□ -0.96
VCAN-208ENST00000512590 MAPK14Q16539 360 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 SPANXN2Q5MJ10 180 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.09□□□□□ -0.96
VCAN-208ENST00000512590 PAGE2Q7Z2X7 111 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 THAP5Q7Z6K1 395 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 TFAP2DQ7Z6R9 452 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 TPD52L3Q96J77 140 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 MPP4Q96JB8 637 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 SLC4A5Q9BY07 1137 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 GPR108Q9NPR9 543 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 RDH8Q9NYR8 311 aa9.09□□□□□ -0.96
VCAN-208ENST00000512590 UBA2Q9UBT2 640 aaPredicted RBP9.09□□□□□ -0.96
VCAN-208ENST00000512590 RPAP1Q9BWH6 1393 aaPredicted RBP9.09□□□□□ -0.96
VCAN-208ENST00000512590 CPSF1Q10570 1443 aaKnown RBP9.08□□□□□ -0.96
VCAN-208ENST00000512590 NEMP2A6NFY4 417 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 O00370 1275 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 RGS20O76081 388 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 AKR1B1P15121 316 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 ADORA2AP29274 412 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 GALK1P51570 392 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 RPL19P84098 196 aaKnown RBP9.08□□□□□ -0.96
VCAN-208ENST00000512590 PKDCCQ504Y2 493 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 ATP6AP1LQ52LC2 224 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 ALG1LQ6GMV1 187 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 CCSAPQ6IQ19 270 aaPredicted RBP9.08□□□□□ -0.96
VCAN-208ENST00000512590 XRRA1Q6P2D8 792 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 OTOP3Q7RTS5 596 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 UTP15Q8TED0 518 aaKnown RBP9.08□□□□□ -0.96
VCAN-208ENST00000512590 SLC9A6Q92581 669 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 CELF1Q92879 486 aaKnown RBP9.08□□□□□ -0.96
VCAN-208ENST00000512590 TCEAL3Q969E4 200 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 WWP1Q9H0M0 922 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 EPB41L4BQ9H329 900 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 PCDHGC3Q9UN70 934 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 DNMT3AQ9Y6K1 912 aaPredicted RBP9.08□□□□□ -0.96
VCAN-208ENST00000512590 LOC102724159A0A0B4J2E5 919 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 A0A0D9SFI3 127 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 TRIM43BA6NCK2 446 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 ENTPD5O75356 428 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 MMP1P03956 469 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 HMGCRP04035 888 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 ATP5C1P36542 298 aaKnown RBP9.08□□□□□ -0.96
VCAN-208ENST00000512590 RXRGP48443 463 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 PLP2Q04941 152 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 PWP2Q15269 919 aaKnown RBP9.08□□□□□ -0.96
VCAN-208ENST00000512590 BMT2Q1RMZ1 405 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 HECTD3Q5T447 861 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 DAB2IPQ5VWQ8 1189 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 ALDH16A1Q8IZ83 802 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 FBXO15Q8NCQ5 510 aaPredicted RBP9.08□□□□□ -0.96
VCAN-208ENST00000512590 TRMT10AQ8TBZ6 339 aaKnown RBP9.08□□□□□ -0.96
VCAN-208ENST00000512590 STARD8Q92502 1023 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 SLC39A8Q9C0K1 460 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 TTYH1Q9H313 450 aaPredicted RBP9.08□□□□□ -0.96
VCAN-208ENST00000512590 PAK5Q9P286 719 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 MAFFQ9ULX9 164 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 ZNF510Q9Y2H8 683 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 PER2O15055 1255 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 AKAP8O43823 692 aaKnown RBP9.08□□□□□ -0.96
VCAN-208ENST00000512590 IDH3BO43837 385 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 GATBO75879 557 aaKnown RBP9.08□□□□□ -0.96
VCAN-208ENST00000512590 HSMCR30P0CW71 290 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 DBTP11182 482 aaKnown RBP9.08□□□□□ -0.96
VCAN-208ENST00000512590 FDPSP14324 419 aaKnown RBP9.08□□□□□ -0.96
VCAN-208ENST00000512590 USP11P51784 963 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 ARFIP1P53367 373 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 BCAT1P54687 386 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 PLOD1Q02809 727 aaPredicted RBP9.08□□□□□ -0.96
VCAN-208ENST00000512590 ACVR2BQ13705 512 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 PLA2G4EQ3MJ16 856 aa9.08□□□□□ -0.96
VCAN-208ENST00000512590 ESCO2Q56NI9 601 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms