RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 CMTM8Q8IZV2 173 aa9.81□□□□□ -0.84
SNF8-211ENST00000512243 TXLNBQ8N3L3 684 aa9.81□□□□□ -0.84
SNF8-211ENST00000512243 ARL14EPQ8N8R7 260 aaPredicted RBP9.81□□□□□ -0.84
SNF8-211ENST00000512243 ACRBPQ8NEB7 543 aa9.81□□□□□ -0.84
SNF8-211ENST00000512243 ZSCAN18Q8TBC5 510 aaPredicted RBP9.81□□□□□ -0.84
SNF8-211ENST00000512243 FGF13Q92913 245 aa9.81□□□□□ -0.84
SNF8-211ENST00000512243 MCEEQ96PE7 176 aa9.81□□□□□ -0.84
SNF8-211ENST00000512243 SLC2A13Q96QE2 648 aa9.81□□□□□ -0.84
SNF8-211ENST00000512243 PPP1R9BQ96SB3 815 aa9.81□□□□□ -0.84
SNF8-211ENST00000512243 PACSIN1Q9BY11 444 aa9.81□□□□□ -0.84
SNF8-211ENST00000512243 THAP2Q9H0W7 228 aa9.81□□□□□ -0.84
SNF8-211ENST00000512243 MRPL47Q9HD33 250 aaKnown RBP9.81□□□□□ -0.84
SNF8-211ENST00000512243 RRN3Q9NYV6 651 aa9.81□□□□□ -0.84
SNF8-211ENST00000512243 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.81□□□□□ -0.84
SNF8-211ENST00000512243 INTUQ9ULD6 942 aa9.81□□□□□ -0.84
SNF8-211ENST00000512243 STAP1Q9ULZ2 295 aa9.81□□□□□ -0.84
SNF8-211ENST00000512243 NCOR1O75376 2440 aa9.81□□□□□ -0.84
SNF8-211ENST00000512243 MYOFQ9NZM1 2061 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 SIGLEC16A6NMB1 481 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 ZNF263O14978 683 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 MDM4O15151 490 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 GJB6O95452 261 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 OLFM2O95897 454 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 CYP1A2P05177 515 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 IL9P15248 144 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 HDCP19113 662 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 MATKP42679 507 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 SULT1E1P49888 294 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 KRT83P78385 493 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 SLC7A9P82251 487 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 CCZ1BP86790 482 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 CCZ1P86791 482 aaPredicted RBP9.8□□□□□ -0.84
SNF8-211ENST00000512243 TAF5Q15542 800 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 MSMPQ1L6U9 139 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 DCAF6Q58WW2 860 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 PLEKHA7Q6IQ23 1121 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 KLHDC10Q6PID8 442 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 MTSS1LQ765P7 747 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 ZNF765Q7L2R6 523 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 ARCQ7LC44 396 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 PDZD3Q86UT5 571 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 TAC4Q86UU9 113 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 DDX42Q86XP3 938 aaKnown RBP eCLIP9.8□□□□□ -0.84
SNF8-211ENST00000512243 DEFB106AQ8N104 65 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 ZNF276Q8N554 614 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 ZNF564Q8TBZ8 553 aaPredicted RBP9.8□□□□□ -0.84
SNF8-211ENST00000512243 DQX1Q8TE96 717 aaKnown RBP9.8□□□□□ -0.84
SNF8-211ENST00000512243 ARHGEF26Q96DR7 871 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 ASB16Q96NS5 453 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 SERPINB11Q96P15 392 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 NUP85Q9BW27 656 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 SLC46A2Q9BY10 475 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 SMOC2Q9H3U7 446 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 FAM204AQ9H8W3 233 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 KIF9Q9HAQ2 790 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 CRIM1Q9NZV1 1036 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 MARCH2Q9P0N8 246 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 CTTNBP2NLQ9P2B4 639 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 EPS15L1Q9UBC2 864 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 TMEM59LQ9UK28 342 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 NUDT5Q9UKK9 219 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 NAALADL1Q9UQQ1 740 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 PCDHA13Q9Y5I0 950 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 CPQQ9Y646 472 aa9.8□□□□□ -0.84
SNF8-211ENST00000512243 TCRBV5S1A1TA0A578 114 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 SLC12A8A0AV02 714 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 C2CD4DB7Z1M9 353 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 TBX18O95935 607 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 WNT11O96014 354 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 FYNP06241 537 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 IRF1P10914 325 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 PDGFRAP16234 1089 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 GPD1P21695 349 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 SDC4P31431 198 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 GBP1P32455 592 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 FLT3P36888 993 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 KCNQ1P51787 676 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 KPNA1P52294 538 aaPredicted RBP9.79□□□□□ -0.84
SNF8-211ENST00000512243 VAV2P52735 878 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 ID3Q02535 119 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 MAMLD1Q13495 774 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 CPSF6Q16630 551 aaKnown RBP eCLIP9.79□□□□□ -0.84
SNF8-211ENST00000512243 MIB1Q86YT6 1006 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 ARID3BQ8IVW6 561 aaPredicted RBP9.79□□□□□ -0.84
SNF8-211ENST00000512243 RHOT2Q8IXI1 618 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 EMC1Q8N766 993 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 JOSD2Q8TAC2 188 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 ATXN2LQ8WWM7 1075 aaKnown RBP9.79□□□□□ -0.84
SNF8-211ENST00000512243 RXFP2Q8WXD0 754 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 RFFLQ8WZ73 363 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 SMARCD2Q92925 531 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 RPGRIP1Q96KN7 1286 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 ZSWIM3Q96MP5 696 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 FANCD2OSQ96PS1 177 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 SLC22A12Q96S37 553 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 DESI2Q9BSY9 194 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 DDX23Q9BUQ8 820 aaKnown RBP9.79□□□□□ -0.84
SNF8-211ENST00000512243 LRRC4CQ9HCJ2 640 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 C1GALT1Q9NS00 363 aa9.79□□□□□ -0.84
SNF8-211ENST00000512243 DDIT4Q9NX09 232 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms