RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 KRT3P12035 628 aa16.97■□□□□ 0.31
DDX41-213ENST00000512027 SDC4P31431 198 aa16.97■□□□□ 0.31
DDX41-213ENST00000512027 IRX4P78413 519 aa16.97■□□□□ 0.31
DDX41-213ENST00000512027 ZNF177Q13360 481 aaPredicted RBP16.97■□□□□ 0.31
DDX41-213ENST00000512027 NR1I3Q14994 352 aa16.97■□□□□ 0.31
DDX41-213ENST00000512027 ASIC2Q16515 512 aa16.97■□□□□ 0.31
DDX41-213ENST00000512027 HNRNPA1L2Q32P51 320 aaKnown RBP16.97■□□□□ 0.31
DDX41-213ENST00000512027 C5orf22Q49AR2 442 aa16.97■□□□□ 0.31
DDX41-213ENST00000512027 TRIM61Q5EBN2 209 aa16.97■□□□□ 0.31
DDX41-213ENST00000512027 STPG1Q5TH74 334 aa16.97■□□□□ 0.31
DDX41-213ENST00000512027 RNF219Q5W0B1 726 aaPredicted RBP16.97■□□□□ 0.31
DDX41-213ENST00000512027 ARCQ7LC44 396 aa16.97■□□□□ 0.31
DDX41-213ENST00000512027 SYT12Q8IV01 421 aa16.97■□□□□ 0.31
DDX41-213ENST00000512027 SELENOOQ9BVL4 669 aa16.97■□□□□ 0.31
DDX41-213ENST00000512027 TTYH3Q9C0H2 523 aa16.97■□□□□ 0.31
DDX41-213ENST00000512027 PILRBQ9UKJ0 227 aa16.97■□□□□ 0.31
DDX41-213ENST00000512027 PCDH15Q96QU1 1955 aa16.97■□□□□ 0.31
DDX41-213ENST00000512027 TCRBV5S1A1TA0A578 114 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 KHNYNO15037 678 aaKnown RBP16.96■□□□□ 0.31
DDX41-213ENST00000512027 ATMINO43313 823 aaPredicted RBP16.96■□□□□ 0.31
DDX41-213ENST00000512027 CLDN11O75508 207 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 ENDOD1O94919 500 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 CFIP05156 583 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 CALB1P05937 261 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 SRPRAP08240 638 aaKnown RBP16.96■□□□□ 0.31
DDX41-213ENST00000512027 ACSL1P33121 698 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 CDH4P55283 916 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 SPDYCQ5MJ68 293 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 C9orf64Q5T6V5 341 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 WDR59Q6PJI9 974 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 RGL4Q8IZJ4 473 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 CCDC185Q8N715 623 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 C3orf20Q8ND61 904 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 FAM172AQ8WUF8 416 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 FEM1AQ9BSK4 669 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 RTKNQ9BST9 563 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 HAUS4Q9H6D7 363 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 SUN2Q9UH99 717 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 OR51B4Q9Y5P0 310 aa16.96■□□□□ 0.31
DDX41-213ENST00000512027 ITIH6Q6UXX5 1313 aa16.96■□□□□ 0.3
DDX41-213ENST00000512027 NCOR2Q9Y618 2525 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 MED19A0JLT2 244 aaPredicted RBP16.95■□□□□ 0.3
DDX41-213ENST00000512027 CCP110O43303 1012 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 FOXD2O60548 495 aaPredicted RBP16.95■□□□□ 0.3
DDX41-213ENST00000512027 SNAP91O60641 907 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 DNTTP04053 509 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 RHOCP08134 193 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 SKILP12757 684 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 PTMSP20962 102 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 TNFAIP3P21580 790 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 GPD1P21695 349 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 KCNA4P22459 653 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 RRM1P23921 792 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 PTPN9P43378 593 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 PLK1P53350 603 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 HDAC4P56524 1084 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 GSCP56915 257 aaPredicted RBP16.95■□□□□ 0.3
DDX41-213ENST00000512027 RPL7AP62424 266 aaKnown RBP16.95■□□□□ 0.3
DDX41-213ENST00000512027 C1QBPQ07021 282 aaKnown RBP16.95■□□□□ 0.3
DDX41-213ENST00000512027 SLC12A1Q13621 1099 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 PEAR1Q5VY43 1037 aaPredicted RBP16.95■□□□□ 0.3
DDX41-213ENST00000512027 ZNF776Q68DI1 518 aaPredicted RBP16.95■□□□□ 0.3
DDX41-213ENST00000512027 ACAD10Q6JQN1 1059 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 DNAJC24Q6P3W2 148 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 ZNF571Q7Z3V5 609 aaPredicted RBP16.95■□□□□ 0.3
DDX41-213ENST00000512027 MCOLN2Q8IZK6 566 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 STK40Q8N2I9 435 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 PTPRN2Q92932 1015 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 ZNF419Q96HQ0 510 aaPredicted RBP16.95■□□□□ 0.3
DDX41-213ENST00000512027 MCEEQ96PE7 176 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 PSMB7Q99436 277 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 MUC3BQ9H195 1237 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 RSPH9Q9H1X1 276 aaPredicted RBP16.95■□□□□ 0.3
DDX41-213ENST00000512027 SERGEFQ9UGK8 458 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 VPS28Q9UK41 221 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 MYO6Q9UM54 1294 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 TBC1D30Q9Y2I9 924 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 PAXBP1Q9Y5B6 917 aa16.95■□□□□ 0.3
DDX41-213ENST00000512027 IGLV3-10A0A075B6K4 115 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 A0A0D9SEW6 157 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 DRGXA6NNA5 263 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 C4orf47A7E2U8 309 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 MEI4A8MW99 385 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 FAM72CH0Y354 149 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 GOLGA6L19H0YKK7 550 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 MID1O15344 667 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 IGLV3-19P01714 112 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 GLDCP23378 1020 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 PBX1P40424 430 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 MAPK8P45983 427 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 PSMD8P48556 350 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 TPM4P67936 248 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 MTA1Q13330 715 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 FAM72AQ5TYM5 149 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 DCAF12L1Q5VU92 463 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 SFMBT2Q5VUG0 894 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 FAM72DQ6L9T8 149 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 LRRC31Q6UY01 552 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 FAM72BQ86X60 149 aa16.94■□□□□ 0.3
DDX41-213ENST00000512027 MMAAQ8IVH4 418 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms