RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 KIAA1324Q6UXG2 1013 aaKnown RBP16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 LRRC31Q6UY01 552 aa16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 DEFB119Q8N690 84 aa16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 CPLX3Q8WVH0 158 aa16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 PRCCQ92733 491 aaPredicted RBP16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 SYN2Q92777 582 aaPredicted RBP16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 RMDN1Q96DB5 314 aa16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 RPL10LQ96L21 214 aaKnown RBP16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 SMOC1Q9H4F8 434 aa16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 VPS45Q9NRW7 570 aa16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 TMEM74BQ9NUR3 256 aa16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 DLL3Q9NYJ7 618 aa16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 WSB2Q9NYS7 404 aaPredicted RBP16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 USP36Q9P275 1121 aaKnown RBP16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 CAPN11Q9UMQ6 739 aa16.61■□□□□ 0.25
PDLIM5-212ENST00000509333 A0A1W2PQJ5 194 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 TARSL2A2RTX5 802 aaKnown RBP16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 TMCO5BA8MYB1 307 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 TTC34A8MYJ7 566 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 E9PAM4 449 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 FOXD2O60548 495 aaPredicted RBP16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 SRGAP2O75044 1071 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 IGLV3-19P01714 112 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 GPD1P21695 349 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 OXTRP30559 389 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 ID4P47928 161 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 VASPP50552 380 aaPredicted RBP16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 ZNF143P52747 638 aaPredicted RBP16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 ST8SIA6P61647 398 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 RPS14P62263 151 aaKnown RBP16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 LMNB2Q03252 620 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 SULT2A1Q06520 285 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 KLHL30Q0D2K2 578 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 MAMLD1Q13495 774 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 CDO1Q16878 200 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 RSPO4Q2I0M5 234 aaPredicted RBP16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 HGSNATQ68CP4 663 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 PLEKHA7Q6IQ23 1121 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 PPP1R2P3Q6NXS1 205 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 LRSAM1Q6UWE0 723 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 DNAAF5Q86Y56 855 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 TOE1Q96GM8 510 aaKnown RBP16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 FAM129BQ96TA1 746 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 RXFP3Q9NSD7 469 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 MPP6Q9NZW5 540 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 ZNF212Q9UDV6 495 aa16.6■□□□□ 0.25
PDLIM5-212ENST00000509333 CKAP5Q14008 2032 aa16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 AP5Z1O43299 807 aa16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 GDF9O60383 454 aa16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 SIN3BO75182 1162 aa16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 CD6P30203 668 aa16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 ZBED6P86452 979 aa16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 NRG1Q02297 640 aaPredicted RBP16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 RPL6Q02878 288 aaKnown RBP16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 ZNF33AQ06730 810 aa16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 ARL13BQ3SXY8 428 aa16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 RNF219Q5W0B1 726 aaPredicted RBP16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 SLC41A1Q8IVJ1 513 aa16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 FAM172AQ8WUF8 416 aa16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 PIGKQ92643 395 aa16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 PTPRN2Q92932 1015 aa16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 XPO4Q9C0E2 1151 aaKnown RBP16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 RSPH9Q9H1X1 276 aaPredicted RBP16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 PPARGC1AQ9UBK2 798 aaKnown RBP16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 OR12D3Q9UGF7 316 aa16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 PILRBQ9UKJ0 227 aa16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 BZW2Q9Y6E2 419 aaKnown RBP16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 DMXL1Q9Y485 3027 aa16.59■□□□□ 0.25
PDLIM5-212ENST00000509333 FAM72CH0Y354 149 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 RTN2O75298 545 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 ITPKAP23677 461 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 NUMBP49757 651 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 STK19P49842 368 aaPredicted RBP16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 IRX4P78413 519 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 OGDHQ02218 1023 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 FAM72AQ5TYM5 149 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 FAM72DQ6L9T8 149 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 DNAJC24Q6P3W2 148 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 SETD3Q86TU7 594 aaPredicted RBP16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 FAM72BQ86X60 149 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 SYT12Q8IV01 421 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 CCDC185Q8N715 623 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 FRS2Q8WU20 508 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 NTAN1Q96AB6 310 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 PSMB7Q99436 277 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 CNPY3Q9BT09 278 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 ISCUQ9H1K1 167 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 TSPY26PQ9H489 355 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 FBRSQ9HAH7 460 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 PARVAQ9NVD7 372 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 LUC7L2Q9Y383 392 aaKnown RBP16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 ITIH6Q6UXX5 1313 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 PI4KAP42356 2102 aa16.58■□□□□ 0.24
PDLIM5-212ENST00000509333 KNL1Q8NG31 2342 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 A0A0D9SEW6 157 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 ILVBLA1L0T0 632 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 TMEM191CA6NGB0 347 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 PATE3B3GLJ2 98 aa16.57■□□□□ 0.24
PDLIM5-212ENST00000509333 ATP9BO43861 1147 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms