RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 RGL4Q8IZJ4 473 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 LGI2Q8N0V4 545 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 FRMD1Q8N878 549 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 ZNF366Q8N895 744 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 TC2NQ8N9U0 490 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 SUMF1Q8NBK3 374 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 TXNDC5Q8NBS9 432 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 CYB5D2Q8WUJ1 264 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 CPLX3Q8WVH0 158 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 AZIN2Q96A70 460 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 BTBD6Q96KE9 485 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 MCEEQ96PE7 176 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 NELL2Q99435 816 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 PSMB7Q99436 277 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 CHP1Q99653 195 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 HINFPQ9BQA5 517 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 EDEM3Q9BZQ6 932 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 DCLK3Q9C098 648 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 KCNH6Q9H252 994 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 ABCB8Q9NUT2 735 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 NDFIP2Q9NV92 336 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 SEPT11Q9NVA2 429 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 GPATCH2LQ9NWQ4 482 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 CACNA2D2Q9NY47 1150 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 ADAM22Q9P0K1 906 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 FBXO4Q9UKT5 387 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 MRPS17Q9Y2R5 130 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 STARD13Q9Y3M8 1113 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 OR51B4Q9Y5P0 310 aa7.45□□□□□ -1.22
TOPBP1-207ENST00000509162 IGLV3-10A0A075B6K4 115 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 PRR23AA6NEV1 266 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 PROB1E7EW31 1015 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 GOLGA6L19H0YKK7 550 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 DCLK1O15075 740 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 LAMTOR5O43504 91 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 LUC7L3O95232 432 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 APODP05090 189 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 HLA-EP13747 358 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 MZF1P28698 734 aaPredicted RBP7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 RDXP35241 583 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 CSKP41240 450 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 NSFP46459 744 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 HARS2P49590 506 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 CCR3P51677 355 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 ZNF75DP51815 510 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 METAP1P53582 386 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 COPAP53621 1224 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 CDK17Q00537 523 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 KLHL30Q0D2K2 578 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 SEMA3BQ13214 749 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 MAMLD1Q13495 774 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 AUHQ13825 339 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 CDO1Q16878 200 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 ZNF528Q3MIS6 628 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 FILIP1LQ4L180 1135 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 HEATR6Q6AI08 1181 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 TXNRD3NBQ6F5E7 133 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 MRPL14Q6P1L8 145 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 DNAJC24Q6P3W2 148 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 SYT13Q7L8C5 426 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 ANKS1BQ7Z6G8 1248 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 TMEM139Q8IV31 216 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 APCDD1Q8J025 514 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 PYROXD2Q8N2H3 581 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 SYNPOQ8N3V7 929 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 FAM172AQ8WUF8 416 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 BTN2A3PQ96KV6 586 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 NOX5Q96PH1 765 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 GABRG3Q99928 467 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 IER2Q9BTL4 223 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 TPSD1Q9BZJ3 242 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 TKTL2Q9H0I9 626 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 THAP2Q9H0W7 228 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 ISCUQ9H1K1 167 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 NOL6Q9H6R4 1146 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 SYNCQ9H7C4 482 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 ABHD10Q9NUJ1 306 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 STIM2Q9P246 746 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 DEC1Q9P2X7 70 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 THAP10Q9P2Z0 257 aaPredicted RBP7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 GGA2Q9UJY4 613 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 VANGL2Q9ULK5 521 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 MFHAS1Q9Y4C4 1052 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 CEP83Q9Y592 693 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 ACTL7AQ9Y615 435 aa7.44□□□□□ -1.22
TOPBP1-207ENST00000509162 EP300Q09472 2414 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 A0A0U1RQJ8 604 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 TMEM191CA6NGB0 347 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 DRGXA6NNA5 263 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 C10orf142B7Z368 130 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 ERVH48-1M5A8F1 160 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 CAPN9O14815 690 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 PABPC1P11940 636 aaKnown RBP7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 VAV1P15498 845 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 GABRG2P18507 467 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 GPD1P21695 349 aa7.43□□□□□ -1.22
TOPBP1-207ENST00000509162 GLDCP23378 1020 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms