RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 UMODL1-AS1Q8N2C9 162 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 LRRC43Q8N309 656 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 NPWQ8N729 165 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 RTL3Q8N8U3 475 aaKnown RBP9.46□□□□□ -0.9
HTT-205ENST00000509043 SCAMP5Q8TAC9 235 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 GABPB2Q8TAK5 448 aaPredicted RBP9.46□□□□□ -0.9
HTT-205ENST00000509043 OVCA2Q8WZ82 227 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 ZNF75CPQ92670 426 aaPredicted RBP9.46□□□□□ -0.9
HTT-205ENST00000509043 MRRFQ96E11 262 aaKnown RBP9.46□□□□□ -0.9
HTT-205ENST00000509043 SLC39A13Q96H72 371 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 OXNAD1Q96HP4 312 aaPredicted RBP9.46□□□□□ -0.9
HTT-205ENST00000509043 FCRL2Q96LA5 508 aaPredicted RBP9.46□□□□□ -0.9
HTT-205ENST00000509043 CASD1Q96PB1 797 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 FCRL5Q96RD9 977 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 IL12RB2Q99665 862 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 CPNE1Q99829 537 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 KIF9Q9HAQ2 790 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 PLAC1Q9HBJ0 212 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 TLR8Q9NR97 1041 aaKnown RBP9.46□□□□□ -0.9
HTT-205ENST00000509043 TMPRSS4Q9NRS4 437 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 VANGL2Q9ULK5 521 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 SLC12A4Q9UP95 1085 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 NEU3Q9UQ49 428 aa9.46□□□□□ -0.9
HTT-205ENST00000509043 A0A1W2PQH9 124 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 FOXO6A8MYZ6 492 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 E9PAM4 449 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 H0YHG0 523 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 KCNK1O00180 336 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 ZBTB24O43167 697 aaPredicted RBP9.45□□□□□ -0.9
HTT-205ENST00000509043 TBC1D4O60343 1298 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 HNRNPCL1O60812 293 aaKnown RBP9.45□□□□□ -0.9
HTT-205ENST00000509043 NBNO60934 754 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 PYGBP11216 843 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 CCNB1P14635 433 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 IBSPP21815 317 aaPredicted RBP9.45□□□□□ -0.9
HTT-205ENST00000509043 DNAJB1P25685 340 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 MGAT1P26572 445 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 GP5P40197 560 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 SCTRP47872 440 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 POLD2P49005 469 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 CSE1LP55060 971 aaKnown RBP9.45□□□□□ -0.9
HTT-205ENST00000509043 TBX4P57082 545 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 TNK2Q07912 1038 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 TRIP4Q15650 581 aaPredicted RBP9.45□□□□□ -0.9
HTT-205ENST00000509043 FAM171A1Q5VUB5 890 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 RWDD4Q6NW29 188 aaKnown RBP9.45□□□□□ -0.9
HTT-205ENST00000509043 FUT10Q6P4F1 479 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 ANKRD33Q7Z3H0 272 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 CCDC91Q7Z6B0 441 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 C10orf67Q8IYJ2 551 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 CRIPAKQ8N1N5 446 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 MICALL1Q8N3F8 863 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 DNAAF3Q8N9W5 541 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.45□□□□□ -0.9
HTT-205ENST00000509043 PDZD8Q8NEN9 1154 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 DBF4BQ8NFT6 615 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 ARNTL2Q8WYA1 636 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 CASP10Q92851 521 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 CERS2Q96G23 380 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 SERAC1Q96JX3 654 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 BTN2A3PQ96KV6 586 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 TOX2Q96NM4 488 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 SRPK1Q96SB4 655 aaKnown RBP9.45□□□□□ -0.9
HTT-205ENST00000509043 SIKE1Q9BRV8 207 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 TUBB6Q9BUF5 446 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 MANSC1Q9H8J5 431 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 MRM3Q9HC36 420 aaKnown RBP9.45□□□□□ -0.9
HTT-205ENST00000509043 MLXIPLQ9NP71 852 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 PAK6Q9NQU5 681 aaPredicted RBP9.45□□□□□ -0.9
HTT-205ENST00000509043 ZFATQ9P243 1243 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 DCDC2Q9UHG0 476 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 GRID1Q9ULK0 1009 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 PRG3Q9Y2Y8 225 aaPredicted RBP9.45□□□□□ -0.9
HTT-205ENST00000509043 PLLPQ9Y342 182 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 BACE2Q9Y5Z0 518 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 PLXNA3P51805 1871 aa9.45□□□□□ -0.9
HTT-205ENST00000509043 IGLV3-10A0A075B6K4 115 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 CXorf49A8MYA2 514 aaPredicted RBP9.44□□□□□ -0.9
HTT-205ENST00000509043 TIMM44O43615 452 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 B4GALT3O60512 393 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 MAFKO60675 156 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 GLRA3O75311 464 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 RFPL1O75677 317 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 CSH1P0DML2 217 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 CSH2P0DML3 217 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 HAPLN1P10915 354 aaPredicted RBP9.44□□□□□ -0.9
HTT-205ENST00000509043 CPB1P15086 417 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 NFKB1P19838 968 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 ADRA1DP25100 572 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 RFC2P35250 354 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 SPRP35270 261 aaPredicted RBP9.44□□□□□ -0.9
HTT-205ENST00000509043 GRIA1P42261 906 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 SERPINB4P48594 390 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 SLC11A1P49279 550 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 TUFMP49411 452 aaKnown RBP9.44□□□□□ -0.9
HTT-205ENST00000509043 LIG3P49916 1009 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 TUBP50607 506 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 RENBPP51606 427 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 RABGGTBP53611 331 aa9.44□□□□□ -0.9
HTT-205ENST00000509043 SESN2P58004 480 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms