RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 TRIM67Q6ZTA4 783 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 TRMT11Q7Z4G4 463 aaKnown RBP10.53□□□□□ -0.72
HTT-204ENST00000508321 TFAP2DQ7Z6R9 452 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 KIAA0907Q7Z7F0 614 aaPredicted RBP10.53□□□□□ -0.72
HTT-204ENST00000508321 METTL3Q86U44 580 aaKnown RBP10.53□□□□□ -0.72
HTT-204ENST00000508321 CPNE8Q86YQ8 564 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 CFAP52Q8N1V2 620 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 UMODL1-AS1Q8N2C9 162 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 DCAF4L2Q8NA75 395 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.53□□□□□ -0.72
HTT-204ENST00000508321 MYEOVQ96EZ4 313 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 C2orf49Q9BVC5 232 aaPredicted RBP10.53□□□□□ -0.72
HTT-204ENST00000508321 MAGEH1Q9H213 219 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 CARD9Q9H257 536 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 TBC1D17Q9HA65 648 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 LTB4R2Q9NPC1 389 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 PLK2Q9NYY3 685 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 MPP6Q9NZW5 540 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 CWC15Q9P013 229 aaKnown RBP10.53□□□□□ -0.72
HTT-204ENST00000508321 ZKSCAN5Q9Y2L8 839 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 JRKLQ9Y4A0 524 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 HYOU1Q9Y4L1 999 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 SNX10Q9Y5X0 201 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 RAD54BQ9Y620 910 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 PIEZO1Q92508 2521 aa10.53□□□□□ -0.72
HTT-204ENST00000508321 KRBA1A5PL33 1030 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 ZSCAN5CA6NGD5 496 aaPredicted RBP10.52□□□□□ -0.73
HTT-204ENST00000508321 C3orf70A6NLC5 250 aaPredicted RBP10.52□□□□□ -0.73
HTT-204ENST00000508321 DCLK1O15075 740 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 CNTN5O94779 1100 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 ATP5BP06576 529 aaKnown RBP10.52□□□□□ -0.73
HTT-204ENST00000508321 CISD3P0C7P0 127 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 ERCC2P18074 760 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 CDKN2BP42772 138 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 TNFRSF4P43489 277 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 VASPP50552 380 aaPredicted RBP10.52□□□□□ -0.73
HTT-204ENST00000508321 IRAK1P51617 712 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 GNA12Q03113 381 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 LMAN2Q12907 356 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 CCINQ13939 588 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 PON2Q15165 354 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 RPS6KA1Q15418 735 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 TAZQ16635 292 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 PLEKHG6Q3KR16 790 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 ANKRD20A8PQ5CZ79 823 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 SEL1L2Q5TEA6 688 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 TXNDC11Q6PKC3 985 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 BZW1Q7L1Q6 419 aaKnown RBP10.52□□□□□ -0.73
HTT-204ENST00000508321 CIR1Q86X95 450 aaPredicted RBP10.52□□□□□ -0.73
HTT-204ENST00000508321 LRRC49Q8IUZ0 686 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 CCDC50Q8IVM0 306 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 KDM1BQ8NB78 822 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 TTC8Q8TAM2 541 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 RAPGEF5Q92565 580 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 KRT35Q92764 455 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 ACDQ96AP0 544 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 LMLNQ96KR4 655 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 MAK16Q9BXY0 300 aaKnown RBP10.52□□□□□ -0.73
HTT-204ENST00000508321 MUC3BQ9H195 1237 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 MFSD1Q9H3U5 465 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 ABCB8Q9NUT2 735 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 KLHL11Q9NVR0 708 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 TRMT1Q9NXH9 659 aaKnown RBP10.52□□□□□ -0.73
HTT-204ENST00000508321 STARD13Q9Y3M8 1113 aa10.52□□□□□ -0.73
HTT-204ENST00000508321 CKAP5Q14008 2032 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 hCG_1818297A0A087WSY0 165 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 TBC1D3BA6NDS4 549 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 ARHGAP42A6NI28 874 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 SHISA7A6NL88 538 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 USP27XA6NNY8 438 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 APOL1O14791 398 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 TUBB4AP04350 444 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 CD48P09326 243 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 TNNT1P13805 278 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 POLR2EP19388 210 aaKnown RBP10.51□□□□□ -0.73
HTT-204ENST00000508321 MX2P20592 715 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 TGM2P21980 687 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 CD70P32970 193 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 CSKP41240 450 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 RPS9P46781 194 aaKnown RBP10.51□□□□□ -0.73
HTT-204ENST00000508321 MARCKSL1P49006 195 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 PEX5P50542 639 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 GALK1P51570 392 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 PAFAH1B3Q15102 231 aaKnown RBP10.51□□□□□ -0.73
HTT-204ENST00000508321 FUT11Q495W5 492 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 PITRM1Q5JRX3 1037 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 AFMIDQ63HM1 303 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 SLC9A4Q6AI14 798 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 FSTL4Q6MZW2 842 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 RETSATQ6NUM9 610 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 SPOCD1Q6ZMY3 1216 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 NAT16Q8N8M0 369 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 PJA1Q8NG27 643 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 WFDC5Q8TCV5 224 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 CASKIN2Q8WXE0 1202 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 TTC17Q96AE7 1141 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 P2RY11Q96G91 374 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 RNF157Q96PX1 679 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 FEM1AQ9BSK4 669 aa10.51□□□□□ -0.73
HTT-204ENST00000508321 LRRC19Q9H756 370 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms