RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 ADAMTS1Q9UHI8 967 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 CEP83Q9Y592 693 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 CELSR3Q9NYQ7 3312 aa13.42□□□□□ -0.26
HMGCS1-205ENST00000508319 PTPRBP23467 1997 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 FAM221BA6H8Z2 402 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 FOXN3O00409 490 aaPredicted RBP13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 RNASEH1O60930 286 aaKnown RBP13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 VAV1P15498 845 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 MZF1P28698 734 aaPredicted RBP13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 GGCXP38435 758 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 PSMD8P48556 350 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 GALCP54803 685 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 SLC6A3Q01959 620 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 SLC12A1Q13621 1099 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 AUHQ13825 339 aaKnown RBP13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 TEAD4Q15561 434 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 TPD52L1Q16890 204 aaPredicted RBP13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 VWA3BQ502W6 1294 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 HSP90AA4PQ58FG1 418 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 RABGAP1LQ5R372 815 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 RNF219Q5W0B1 726 aaPredicted RBP13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 KIAA0895LQ68EN5 471 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 OR6B2Q6IFH4 312 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 NCEH1Q6PIU2 408 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 DBX2Q6ZNG2 339 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 GLRX5Q86SX6 157 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 FAM114A1Q8IWE2 563 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 FAM71AQ8IYT1 594 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 STK40Q8N2I9 435 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 AADATQ8N5Z0 425 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 OR52K2Q8NGK3 314 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 GANCQ8TET4 914 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 SETD7Q8WTS6 366 aaKnown RBP13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 ADAMTS14Q8WXS8 1223 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 IGSF8Q969P0 613 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 SLC12A6Q9UHW9 1150 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 FZD4Q9ULV1 537 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 NCKAP1Q9Y2A7 1128 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 ANKRD6Q9Y2G4 727 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 PCDHB9Q9Y5E1 797 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 PCDHGB2Q9Y5G2 931 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 SNX11Q9Y5W9 270 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 FHOD1Q9Y613 1164 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 HS3ST4Q9Y661 456 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 ITPR1Q14643 2758 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 PLXNB3Q9ULL4 1909 aa13.41□□□□□ -0.26
HMGCS1-205ENST00000508319 FLRT2O43155 660 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 PAGE1O75459 146 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 RNASEH2AO75792 299 aaKnown RBP13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 ADH1BP00325 375 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 ERCC5P28715 1186 aaPredicted RBP13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 KRT9P35527 623 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 PLK1P53350 603 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 ADPRHP54922 357 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 RACK1P63244 317 aaKnown RBP13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 SULT2A1Q06520 285 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 NME3Q13232 169 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 KCNJ12Q14500 433 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 ELAVL3Q14576 367 aaKnown RBP13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 KCNT1Q5JUK3 1230 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 FRS2Q8WU20 508 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 ZCCHC14Q8WYQ9 949 aaKnown RBP13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 RNF34Q969K3 372 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 ALG14Q96F25 216 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 RPRD1AQ96P16 312 aaPredicted RBP13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 NPY6RQ99463 290 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 TUBGCP2Q9BSJ2 902 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 NEUROG2Q9H2A3 272 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 SYNCQ9H7C4 482 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 EBF2Q9HAK2 575 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 PIGVQ9NUD9 493 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 TOR4AQ9NXH8 423 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 VANGL2Q9ULK5 521 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 BTBD3Q9Y2F9 522 aa13.4□□□□□ -0.26
HMGCS1-205ENST00000508319 DOCK4Q8N1I0 1966 aa13.4□□□□□ -0.27
HMGCS1-205ENST00000508319 APC2O95996 2303 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 A0A1W2PPC4 97 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 FAM47DPA6NHR8 397 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 LRRC72A6NJI9 287 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 I6L893 689 aaPredicted RBP13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 M0QYT0 321 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 CYP11B1P15538 503 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 TFE3P19532 575 aaPredicted RBP13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 SLC8A1P32418 973 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 CDH5P33151 784 aaPredicted RBP13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 NOS2P35228 1153 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 RDXP35241 583 aaKnown RBP13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 CTSKP43235 329 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 VASPP50552 380 aaPredicted RBP13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 METAP1P53582 386 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 KCNMA1Q12791 1236 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 SFSWAPQ12872 951 aaKnown RBP13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 MTA1Q13330 715 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 RAPGEF1Q13905 1077 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 DRAP1Q14919 205 aaPredicted RBP13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 C5orf22Q49AR2 442 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 C14orf80Q86SX3 495 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 SLCO6A1Q86UG4 719 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 ZDHHC17Q8IUH5 632 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 PNPLA1Q8N8W4 532 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms