RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 A0A1B0GVM2 712 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 TCAF2A6NFQ2 919 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 PCDHGA12O60330 932 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 HSF2BPO75031 334 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 GRAP2O75791 330 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 DKK1O94907 266 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 ADH1BP00325 375 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 WNT1P04628 370 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 GLI1P08151 1106 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 SLC2A3P11169 496 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 GOT1P17174 413 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 ABCB4P21439 1286 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 C5AR1P21730 350 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 CCR1P32246 355 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 GGCXP38435 758 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 GRK6P43250 576 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 IRAK1P51617 712 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 ADPRHP54922 357 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 SLC12A1Q13621 1099 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 KCNJ12Q14500 433 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 CAMK4Q16566 473 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 EXOC3L4Q17RC7 722 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 EFHC1Q5JVL4 640 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 RABGAP1LQ5R372 815 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 TTC39BQ5VTQ0 682 aaPredicted RBP11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 OR6B2Q6IFH4 312 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 CXorf57Q6NSI4 855 aaKnown RBP11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 FAM183BPQ6ZVS7 135 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 SND1Q7KZF4 910 aaKnown RBP eCLIP11.9□□□□□ -0.52e-6■■■■□ 23.3
HMGCS1-204ENST00000507293 TMPRSS7Q7RTY8 843 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 C1orf131Q8NDD1 294 aaKnown RBP11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 PPP1R13BQ96KQ4 1090 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 RPRD1AQ96P16 312 aaPredicted RBP11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 EBF2Q9HAK2 575 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 AASDHPPTQ9NRN7 309 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 ASNSD1Q9NWL6 643 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 KIAA1468Q9P260 1216 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 PCDHGC3Q9UN70 934 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 LHX6Q9UPM6 363 aa11.9□□□□□ -0.5
HMGCS1-204ENST00000507293 A0A1B0GTQ1 180 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 GTPBP10A4D1E9 387 aaKnown RBP11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 C10orf142B7Z368 130 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 PLK4O00444 970 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 WNT9AO14904 365 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 TNFSF14O43557 240 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 DAB1O75553 588 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 IL1BP01584 269 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 ERBB2P04626 1255 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 PNMA6AP0CW24 399 aaPredicted RBP11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 PON1P27169 355 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 NNMTP40261 264 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 MTIF2P46199 727 aaKnown RBP11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 CCR5P51681 352 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 PLK1P53350 603 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 METAP1P53582 386 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 PPP2CBP62714 309 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 PPP2CAP67775 309 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 SULT2A1Q06520 285 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 NME3Q13232 169 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 AUHQ13825 339 aaKnown RBP11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 ELAVL3Q14576 367 aaKnown RBP11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 INAVAQ3KP66 663 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 CCDC157Q569K6 752 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 PRAMEF14Q5SWL7 426 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 FBXL22Q6P050 247 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 OLFML1Q6UWY5 402 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 C11orf57Q6ZUT1 292 aaPredicted RBP11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 MARCH9Q86YJ5 346 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 GATAD2AQ86YP4 633 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 IRF2BP1Q8IU81 584 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 OR52K2Q8NGK3 314 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 OR14C36Q8NHC7 312 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 MDM1Q8TC05 714 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 FRS2Q8WU20 508 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 NOX5Q96PH1 765 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 CCDC86Q9H6F5 360 aaKnown RBP11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 SIX2Q9NPC8 291 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 FTSJ1Q9UET6 329 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 VANGL2Q9ULK5 521 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 PKD1L2Q7Z442 2459 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 ZFHX4Q86UP3 3567 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 CFAP47Q6ZTR5 3102 aa11.89□□□□□ -0.51
HMGCS1-204ENST00000507293 DOCK4Q8N1I0 1966 aa11.88□□□□□ -0.51
HMGCS1-204ENST00000507293 A0A1W2PR77 199 aa11.88□□□□□ -0.51
HMGCS1-204ENST00000507293 DFNA5O60443 496 aa11.88□□□□□ -0.51
HMGCS1-204ENST00000507293 CD38P28907 300 aa11.88□□□□□ -0.51
HMGCS1-204ENST00000507293 DRD3P35462 400 aa11.88□□□□□ -0.51
HMGCS1-204ENST00000507293 OXCT1P55809 520 aa11.88□□□□□ -0.51
HMGCS1-204ENST00000507293 UBE2HP62256 183 aa11.88□□□□□ -0.51
HMGCS1-204ENST00000507293 PTK2Q05397 1052 aa11.88□□□□□ -0.51
HMGCS1-204ENST00000507293 PTPN20Q4JDL3 420 aa11.88□□□□□ -0.51
HMGCS1-204ENST00000507293 OTUD1Q5VV17 481 aaPredicted RBP11.88□□□□□ -0.51
HMGCS1-204ENST00000507293 LRSAM1Q6UWE0 723 aa11.88□□□□□ -0.51
HMGCS1-204ENST00000507293 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.88□□□□□ -0.51
HMGCS1-204ENST00000507293 SLC47A2Q86VL8 602 aa11.88□□□□□ -0.51
HMGCS1-204ENST00000507293 OR8D1Q8WZ84 308 aa11.88□□□□□ -0.51
HMGCS1-204ENST00000507293 SKA1Q96BD8 255 aa11.88□□□□□ -0.51
HMGCS1-204ENST00000507293 ALG14Q96F25 216 aa11.88□□□□□ -0.51
HMGCS1-204ENST00000507293 SPAG5Q96R06 1193 aa11.88□□□□□ -0.51
HMGCS1-204ENST00000507293 ELF4Q99607 663 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms