RNA–Protein interactions for RNA: ENST00000507063.1

NEDD4-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4, Length 457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-206ENST00000507063 KCNT1Q5JUK3 1230 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 CBWD5Q5RIA9 395 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 TTC39BQ5VTQ0 682 aaPredicted RBP6.78□□□□□ -1.32
NEDD4-206ENST00000507063 DCAF12L1Q5VU92 463 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 KLHDC10Q6PID8 442 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 LRSAM1Q6UWE0 723 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 CCDC186Q7Z3E2 898 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 PIGZQ86VD9 579 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 TMPRSS6Q8IU80 811 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 FAM186BQ8IYM0 893 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 UBA3Q8TBC4 463 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 MDM1Q8TC05 714 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 WFDC5Q8TCV5 224 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 CYB5D2Q8WUJ1 264 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 TAF4BQ92750 862 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 ERCC4Q92889 916 aaPredicted RBP6.78□□□□□ -1.32
NEDD4-206ENST00000507063 SNX21Q969T3 373 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 MYEOVQ96EZ4 313 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 SIPA1Q96FS4 1042 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 ULBP1Q9BZM6 244 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 CIPCQ9C0C6 399 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 NIF3L1Q9GZT8 377 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 C6orf106Q9H6K1 298 aaPredicted RBP6.78□□□□□ -1.32
NEDD4-206ENST00000507063 CYP3A43Q9HB55 503 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 CISHQ9NSE2 258 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 ELOVL2Q9NXB9 296 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 USP36Q9P275 1121 aaKnown RBP6.78□□□□□ -1.32
NEDD4-206ENST00000507063 SFMBT1Q9UHJ3 866 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 EIF2B4Q9UI10 523 aaKnown RBP6.78□□□□□ -1.32
NEDD4-206ENST00000507063 LSM7Q9UK45 103 aaKnown RBP6.78□□□□□ -1.32
NEDD4-206ENST00000507063 TRAF3IP3Q9Y228 551 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 BTBD3Q9Y2F9 522 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 FNDC3AQ9Y2H6 1198 aaKnown RBP6.78□□□□□ -1.32
NEDD4-206ENST00000507063 SLC27A6Q9Y2P4 619 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 RNF114Q9Y508 228 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 PCDHA5Q9Y5H7 936 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 CACNA1EQ15878 2313 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 IGSF10Q6WRI0 2623 aa6.78□□□□□ -1.32
NEDD4-206ENST00000507063 MYH10P35580 1976 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 BAHCC1Q9P281 2608 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 A0A1B0GVT2 93 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 FAM221BA6H8Z2 402 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 YJEFN3A6XGL0 299 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 KIAA1324LA8MWY0 1029 aaPredicted RBP6.77□□□□□ -1.33
NEDD4-206ENST00000507063 E7ENQ6 273 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 GFRA2O00451 464 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 MSI1O43347 362 aaKnown RBP6.77□□□□□ -1.33
NEDD4-206ENST00000507063 RHOBTB3O94955 611 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 EPHX1P07099 455 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 SYPP08247 313 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 ATXN1LP0C7T5 689 aaKnown RBP6.77□□□□□ -1.33
NEDD4-206ENST00000507063 FTH1P19P0C7X4 201 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 HOXD9P28356 352 aaPredicted RBP6.77□□□□□ -1.33
NEDD4-206ENST00000507063 HLA-FP30511 346 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 ACSL1P33121 698 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 HOXD12P35452 270 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 PSMC2P35998 433 aaKnown RBP6.77□□□□□ -1.33
NEDD4-206ENST00000507063 SYKP43405 635 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 CSNK1EP49674 416 aaKnown RBP6.77□□□□□ -1.33
NEDD4-206ENST00000507063 TKTL1P51854 596 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 PMS1P54277 932 aaKnown RBP6.77□□□□□ -1.33
NEDD4-206ENST00000507063 GP2P55259 537 aaKnown RBP6.77□□□□□ -1.33
NEDD4-206ENST00000507063 YWHAGP61981 247 aaKnown RBP eCLIP6.77□□□□□ -1.33
NEDD4-206ENST00000507063 GOLGA8FQ08AF8 430 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 GOLGA8DPQ0D2H9 430 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 LRMPQ12912 555 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 HLA-BQ31612 363 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 PREPLQ4J6C6 727 aaPredicted RBP6.77□□□□□ -1.33
NEDD4-206ENST00000507063 ZCWPW2Q504Y3 356 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 RAB41Q5JT25 222 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 PRAMEF14Q5SWL7 426 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 ZNF438Q7Z4V0 828 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 ADIPOR2Q86V24 386 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 FMNL3Q8IVF7 1028 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 NAXDQ8IW45 347 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 IL22RA1Q8N6P7 574 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 SETD7Q8WTS6 366 aaKnown RBP6.77□□□□□ -1.33
NEDD4-206ENST00000507063 DDI1Q8WTU0 396 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 DNASE2BQ8WZ79 361 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 TMEM176AQ96HP8 235 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 ZSWIM1Q9BR11 485 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 RASSF4Q9H2L5 321 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 GAREM1Q9H706 876 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 TMEM8AQ9HCN3 771 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 PNPLA8Q9NP80 782 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 RAB20Q9NX57 234 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 CLIC5Q9NZA1 410 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 MARCH2Q9P0N8 246 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 PCOLCE2Q9UKZ9 415 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 CFAP45Q9UL16 551 aa6.77□□□□□ -1.33
NEDD4-206ENST00000507063 CACNA1GO43497 2377 aa6.76□□□□□ -1.33
NEDD4-206ENST00000507063 PLXNB3Q9ULL4 1909 aa6.76□□□□□ -1.33
NEDD4-206ENST00000507063 PCNX2A6NKB5 2137 aa6.76□□□□□ -1.33
NEDD4-206ENST00000507063 PI4KAP42356 2102 aa6.76□□□□□ -1.33
NEDD4-206ENST00000507063 A0A1B0GTW7 788 aa6.76□□□□□ -1.33
NEDD4-206ENST00000507063 FAM149AA5PLN7 773 aa6.76□□□□□ -1.33
NEDD4-206ENST00000507063 METTL12A8MUP2 240 aa6.76□□□□□ -1.33
NEDD4-206ENST00000507063 MEI4A8MW99 385 aa6.76□□□□□ -1.33
NEDD4-206ENST00000507063 MAPK13O15264 365 aa6.76□□□□□ -1.33
NEDD4-206ENST00000507063 SYNCRIPO60506 623 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms