RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 CCR5P51681 352 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 CDH4P55283 916 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 KRT83P78385 493 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 NME3Q13232 169 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 AUHQ13825 339 aaKnown RBP14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 RAPGEF1Q13905 1077 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 KCNJ12Q14500 433 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 DRAP1Q14919 205 aaPredicted RBP14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 TAF5Q15542 800 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 HLA-BQ31612 363 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 PTPN20Q4JDL3 420 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 MIIPQ5JXC2 388 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 KLHDC7AQ5VTJ3 777 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 FBXL22Q6P050 247 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 LRRC31Q6UY01 552 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 DBX2Q6ZNG2 339 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 ARCQ7LC44 396 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 ADAT2Q7Z6V5 191 aaKnown RBP14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 ERICH1Q86X53 443 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 ENOX1Q8TC92 643 aaKnown RBP14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 ADAMTS14Q8WXS8 1223 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 OR8D1Q8WZ84 308 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 IGSF8Q969P0 613 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 CCDC114Q96M63 670 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 ACE2Q9BYF1 805 aaPredicted RBP14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 STK33Q9BYT3 514 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 WDCPQ9H6R7 721 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 TM9SF3Q9HD45 589 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 PLCB1Q9NQ66 1216 aa14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 FARP1Q9Y4F1 1045 aaPredicted RBP14.86□□□□□ -0.03
HMGCS1-203ENST00000507004 SYNJ2BP-COX16A0A087WUM0 186 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 A0A1B0GVT2 93 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 C1QTNF3-AMACRE9PGA6 284 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 VILLO15195 856 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 PCDHGA12O60330 932 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 RNASEH2AO75792 299 aaKnown RBP14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 ERBB2P04626 1255 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 UCHL3P15374 230 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 PDGFRAP16234 1089 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 CXCR3P49682 368 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 CCT8P50990 548 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 GALCP54803 685 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 C21orf59P57076 290 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 TCP11X2Q5H9J9 407 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 MMS22LQ6ZRQ5 1243 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 SETD3Q86TU7 594 aaPredicted RBP14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 MMAAQ8IVH4 418 aaKnown RBP14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 APCDD1Q8J025 514 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 ANKRD20A12PQ8NF67 263 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 OR2I1PQ8NGU4 316 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 SETD7Q8WTS6 366 aaKnown RBP14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 PTPRN2Q92932 1015 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 NT5C3BQ969T7 300 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 MYEOVQ96EZ4 313 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 C1orf74Q96LT6 269 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 NPY6RQ99463 290 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 C2orf49Q9BVC5 232 aaPredicted RBP14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 RETREG1Q9H6L5 497 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 ARHGEF38Q9NXL2 777 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 COX16Q9P0S2 106 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 SLCO3A1Q9UIG8 710 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 PCOLCE2Q9UKZ9 415 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 ANKRD6Q9Y2G4 727 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 TBC1D30Q9Y2I9 924 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 CHD8Q9HCK8 2581 aa14.85□□□□□ -0.03
HMGCS1-203ENST00000507004 NUMA1Q14980 2115 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 A0A1W2PP55 124 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 TTC34A8MYJ7 566 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 MID1O15344 667 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 ATP9BO43861 1147 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 MAGEC1O60732 1142 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 PAGE1O75459 146 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 GRAP2O75791 330 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 MZF1P28698 734 aaPredicted RBP14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 GRK6P43250 576 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 CSNK1EP49674 416 aaKnown RBP14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 CLCN6P51797 869 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 PITX1P78337 314 aaPredicted RBP14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 APBA1Q02410 837 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 DEUP1Q05D60 604 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 KIF19Q2TAC6 998 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 SLC25A52Q3SY17 297 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 FKBP15Q5T1M5 1219 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 CXorf57Q6NSI4 855 aaKnown RBP14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 RAB44Q7Z6P3 723 aaPredicted RBP14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 OXR1Q8N573 874 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 GBP4Q96PP9 640 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 FAM129BQ96TA1 746 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 FEM1AQ9BSK4 669 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 NAA15Q9BXJ9 866 aaKnown RBP14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 NEUROG2Q9H2A3 272 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 VPS28Q9UK41 221 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 VANGL2Q9ULK5 521 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 HS3ST4Q9Y661 456 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 CABIN1Q9Y6J0 2220 aa14.84□□□□□ -0.03
HMGCS1-203ENST00000507004 CXorf51AA0A1B0GTR3 108 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 GOLGA6L22H0YM25 854 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 HYAL3O43820 417 aaPredicted RBP14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 CBFA2T3O75081 653 aa14.83□□□□□ -0.04
HMGCS1-203ENST00000507004 IL1BP01584 269 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms