RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 SPOPO43791 374 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 RAMP2O60895 175 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 ALDH1A2O94788 518 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 CES1P23141 567 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 TARSP26639 723 aaKnown RBP8.69□□□□□ -1.02
PDGFC-205ENST00000506880 EPHB2P29323 1055 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 HLA-FP30511 346 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 NTSR1P30989 418 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 CTNNA1P35221 906 aaKnown RBP8.69□□□□□ -1.02
PDGFC-205ENST00000506880 DPP6P42658 865 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 KIR2DL1P43626 348 aaPredicted RBP8.69□□□□□ -1.02
PDGFC-205ENST00000506880 MAPK8P45983 427 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 ST8SIA6P61647 398 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 DPYSQ14117 519 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 STARD3Q14849 445 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 UBXN2BQ14CS0 331 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 TAZQ16635 292 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 PLEKHG6Q3KR16 790 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 SPDYCQ5MJ68 293 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 FSTL4Q6MZW2 842 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 TIGD7Q6NT04 549 aaPredicted RBP8.69□□□□□ -1.02
PDGFC-205ENST00000506880 TPGS1Q6ZTW0 290 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 RFX8Q6ZV50 586 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 CYP4V2Q6ZWL3 525 aaPredicted RBP8.69□□□□□ -1.02
PDGFC-205ENST00000506880 DSG4Q86SJ6 1040 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 DAAM2Q86T65 1068 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 LRRC57Q8N9N7 239 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 USP33Q8TEY7 942 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 TSC1Q92574 1164 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 FERMT1Q9BQL6 677 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 FEM1AQ9BSK4 669 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 PACSIN1Q9BY11 444 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 ACE2Q9BYF1 805 aaPredicted RBP8.69□□□□□ -1.02
PDGFC-205ENST00000506880 ADAM33Q9BZ11 813 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 SIK2Q9H0K1 926 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 PCED1AQ9H1Q7 454 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 PRMT8Q9NR22 394 aaPredicted RBP8.69□□□□□ -1.02
PDGFC-205ENST00000506880 ABCB8Q9NUT2 735 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 DLGAP2Q9P1A6 1054 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 CALCOCO1Q9P1Z2 691 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 SLC25A13Q9UJS0 675 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 AMFRQ9UKV5 643 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 VANGL2Q9ULK5 521 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 CA14Q9ULX7 337 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 MMP17Q9ULZ9 603 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 PCDHA3Q9Y5H8 950 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 ALG6Q9Y672 507 aa8.69□□□□□ -1.02
PDGFC-205ENST00000506880 SYNJ2BP-COX16A0A087WUM0 186 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 A0A1W2PQ67 120 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 K7EQS6 105 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 CES2O00748 559 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 DAPK3O43293 454 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 ATP9BO43861 1147 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 BUB1BO60566 1050 aaPredicted RBP8.68□□□□□ -1.02
PDGFC-205ENST00000506880 ZRANB2O95218 330 aaKnown RBP eCLIP8.68□□□□□ -1.02
PDGFC-205ENST00000506880 RHOCP08134 193 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 RARAP10276 462 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 TFE3P19532 575 aaPredicted RBP8.68□□□□□ -1.02
PDGFC-205ENST00000506880 AVPR2P30518 371 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 SUOXP51687 545 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 ARSEP51690 589 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 RPS24P62847 133 aaKnown RBP8.68□□□□□ -1.02
PDGFC-205ENST00000506880 ECT2LQ008S8 904 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 GNA12Q03113 381 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 FZD5Q13467 585 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 KRT81Q14533 505 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 MESDQ14696 234 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 POLD3Q15054 466 aaPredicted RBP8.68□□□□□ -1.02
PDGFC-205ENST00000506880 PAFAH1B3Q15102 231 aaKnown RBP8.68□□□□□ -1.02
PDGFC-205ENST00000506880 PON2Q15165 354 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 TFDP3Q5H9I0 405 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 RNF219Q5W0B1 726 aaPredicted RBP8.68□□□□□ -1.02
PDGFC-205ENST00000506880 AFMIDQ63HM1 303 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 CWF19L1Q69YN2 538 aaKnown RBP8.68□□□□□ -1.02
PDGFC-205ENST00000506880 CXorf57Q6NSI4 855 aaKnown RBP8.68□□□□□ -1.02
PDGFC-205ENST00000506880 RFWD3Q6PCD5 774 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 ZC3H14Q6PJT7 736 aaKnown RBP8.68□□□□□ -1.02
PDGFC-205ENST00000506880 TMCO3Q6UWJ1 677 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 BBS5Q8N3I7 341 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 ARFGAP1Q8N6T3 406 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 CCDC185Q8N715 623 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 ZNF513Q8N8E2 541 aaPredicted RBP8.68□□□□□ -1.02
PDGFC-205ENST00000506880 TTC13Q8NBP0 860 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 KCTD6Q8NC69 237 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 HCAR2Q8TDS4 363 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 MAIP1Q8WWC4 291 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 SPOCK2Q92563 424 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 WBP2Q969T9 261 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 CHFRQ96EP1 664 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 ZNF830Q96NB3 372 aaPredicted RBP8.68□□□□□ -1.02
PDGFC-205ENST00000506880 TSGA13Q96PP4 275 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 PPP1R2P1Q96PQ5 205 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 DHX35Q9H5Z1 703 aaKnown RBP8.68□□□□□ -1.02
PDGFC-205ENST00000506880 LMAN1LQ9HAT1 526 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 POLMQ9NP87 494 aaPredicted RBP8.68□□□□□ -1.02
PDGFC-205ENST00000506880 OSGEPQ9NPF4 335 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.68□□□□□ -1.02
PDGFC-205ENST00000506880 COX16Q9P0S2 106 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 NEU3Q9UQ49 428 aa8.68□□□□□ -1.02
PDGFC-205ENST00000506880 ZKSCAN5Q9Y2L8 839 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms