RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 PILRBQ9UKJ0 227 aa16.04■□□□□ 0.16
CLDND1-211ENST00000506575 SPTBN2O15020 2390 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 EDDM13A0A1B0GTR0 161 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 DCDC2BA2VCK2 349 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 ANKRD62A6NC57 917 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 LRRC53A6NM62 1247 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 MEI4A8MW99 385 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 TTC34A8MYJ7 566 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 PATE3B3GLJ2 98 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 SIN3BO75182 1162 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 CFIP05156 583 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 TNFAIP3P21580 790 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 MZF1P28698 734 aaPredicted RBP16.03■□□□□ 0.16
CLDND1-211ENST00000506575 NUMBP49757 651 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 IRAK1P51617 712 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 PLK1P53350 603 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 RPS14P62263 151 aaKnown RBP16.03■□□□□ 0.16
CLDND1-211ENST00000506575 C1QBPQ07021 282 aaKnown RBP16.03■□□□□ 0.16
CLDND1-211ENST00000506575 PTP4A2Q12974 167 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 ASIC2Q16515 512 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 ARL13BQ3SXY8 428 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 C5orf22Q49AR2 442 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 WDR45BQ5MNZ6 344 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 PPP1R2P3Q6NXS1 205 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 LUZP1Q86V48 1076 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 SLC41A1Q8IVJ1 513 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 JOSD2Q8TAC2 188 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 BAP1Q92560 729 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 ZNF419Q96HQ0 510 aaPredicted RBP16.03■□□□□ 0.16
CLDND1-211ENST00000506575 HAPLN3Q96S86 360 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 MUC3BQ9H195 1237 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 MTG2Q9H4K7 406 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 ANLNQ9NQW6 1124 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 TMPRSS4Q9NRS4 437 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 TMEM74BQ9NUR3 256 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 SLC25A13Q9UJS0 675 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 VPS28Q9UK41 221 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 SNX10Q9Y5X0 201 aa16.03■□□□□ 0.16
CLDND1-211ENST00000506575 ITIH6Q6UXX5 1313 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 LNP1A1A4G5 178 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 TARSL2A2RTX5 802 aaKnown RBP16.02■□□□□ 0.16
CLDND1-211ENST00000506575 C2CD4BA6NLJ0 364 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 E9PAM4 449 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 SRGAP2O75044 1071 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 CNTN5O94779 1100 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 ENDOD1O94919 500 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 GJB6O95452 261 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 IGLV3-19P01714 112 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 RHOCP08134 193 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 PTPN9P43378 593 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 STK19P49842 368 aaPredicted RBP16.02■□□□□ 0.16
CLDND1-211ENST00000506575 GSCP56915 257 aaPredicted RBP16.02■□□□□ 0.16
CLDND1-211ENST00000506575 IRX4P78413 519 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 SFSWAPQ12872 951 aaKnown RBP16.02■□□□□ 0.16
CLDND1-211ENST00000506575 ARID5BQ14865 1188 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 DUOXA1Q1HG43 343 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 C15orf59Q2T9L4 293 aaPredicted RBP16.02■□□□□ 0.16
CLDND1-211ENST00000506575 CCDC14Q49A88 953 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 SFMBT2Q5VUG0 894 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 DNAJC24Q6P3W2 148 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 MON1BQ7L1V2 547 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 BNIPLQ7Z465 357 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 IRF2BP2Q7Z5L9 587 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 C3orf20Q8ND61 904 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 CADM4Q8NFZ8 388 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 GANCQ8TET4 914 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 FEM1AQ9BSK4 669 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 RSPH9Q9H1X1 276 aaPredicted RBP16.02■□□□□ 0.16
CLDND1-211ENST00000506575 SUSD2Q9UGT4 822 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 SLCO3A1Q9UIG8 710 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 SCML1Q9UN30 329 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 NCKAP1Q9Y2A7 1128 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 TBC1D30Q9Y2I9 924 aa16.02■□□□□ 0.16
CLDND1-211ENST00000506575 CNOT1A5YKK6 2376 aaKnown RBP16.02■□□□□ 0.15
CLDND1-211ENST00000506575 NYNRINQ9P2P1 1898 aaKnown RBP16.01■□□□□ 0.15
CLDND1-211ENST00000506575 DOCK4Q8N1I0 1966 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 DRGXA6NNA5 263 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 I6L893 689 aaPredicted RBP16.01■□□□□ 0.15
CLDND1-211ENST00000506575 GNSP15586 552 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 DESP17661 470 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 GPD1P21695 349 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 RFC1P35251 1148 aaPredicted RBP16.01■□□□□ 0.15
CLDND1-211ENST00000506575 KRT83P78385 493 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 FANCCQ00597 558 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 NR1I3Q14994 352 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 ZSCAN23Q3MJ62 389 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 ALFQ53S48 1182 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 C6orf118Q5T5N4 469 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 PEAR1Q5VY43 1037 aaPredicted RBP16.01■□□□□ 0.15
CLDND1-211ENST00000506575 ACAD10Q6JQN1 1059 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 SLC23A3Q6PIS1 610 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 STRADAQ7RTN6 431 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 TFAP2DQ7Z6R9 452 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 SETD3Q86TU7 594 aaPredicted RBP16.01■□□□□ 0.15
CLDND1-211ENST00000506575 EDEM3Q9BZQ6 932 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 TMEM9BQ9NQ34 198 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 MPP6Q9NZW5 540 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 SLC6A14Q9UN76 642 aa16.01■□□□□ 0.15
CLDND1-211ENST00000506575 NUMA1Q14980 2115 aa16■□□□□ 0.15
CLDND1-211ENST00000506575 SIGLEC16A6NMB1 481 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms