RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 HAPLN3Q96S86 360 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 XAB2Q9HCS7 855 aaKnown RBP12.49□□□□□ -0.41
LIN54-206ENST00000506560 PCDHA11Q9Y5I1 949 aa12.49□□□□□ -0.41
LIN54-206ENST00000506560 OR1D2P34982 312 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 MAGEA9P43362 315 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 ABCG1P45844 678 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 TBX4P57082 545 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 DEFB103AP81534 67 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 BRMS1LQ5PSV4 323 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 C10orf120Q5SQS8 335 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 MROH9Q5TGP6 573 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 KCTD11Q693B1 232 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 ANKRD33Q7Z3H0 272 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 KDELC2Q7Z4H8 507 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 CACNA2D3Q8IZS8 1091 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 FBXO22Q8NEZ5 403 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 AUTS2Q8WXX7 1259 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 ATP2A3Q93084 1043 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 IGSF8Q969P0 613 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 ZNF778Q96MU6 729 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 CWH43Q9H720 699 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.48□□□□□ -0.41
LIN54-206ENST00000506560 FETUBQ9UGM5 382 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 IKBKGQ9Y6K9 419 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 TTC24A2A3L6 582 aaPredicted RBP12.48□□□□□ -0.41
LIN54-206ENST00000506560 ARHGAP42A6NI28 874 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 FAM159BA6NKW6 160 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 OR6C75A6NL08 312 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 ATP9BO43861 1147 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 MAFKO60675 156 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 ERVK-10P10266 1014 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 TSHRP16473 764 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 KCNQ1P51787 676 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 MLLT6P55198 1093 aaPredicted RBP12.48□□□□□ -0.41
LIN54-206ENST00000506560 NR1H3Q13133 447 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 PPP2R5DQ14738 602 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 MS4A13Q5J8X5 152 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 RNF187Q5TA31 235 aaPredicted RBP12.48□□□□□ -0.41
LIN54-206ENST00000506560 RAP1GAP2Q684P5 730 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 C4orf22Q6V702 233 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 PDZD4Q76G19 769 aaPredicted RBP12.48□□□□□ -0.41
LIN54-206ENST00000506560 SLC26A11Q86WA9 606 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 PTPRN2Q92932 1015 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 TBC1D31Q96DN5 1066 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 CABS1Q96KC9 395 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 TEKT5Q96M29 485 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 SERPINB11Q96P15 392 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 GBA3Q9H227 469 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 FBXO44Q9H4M3 255 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 MOCS1Q9NZB8 636 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 IL37Q9NZH6 218 aa12.48□□□□□ -0.41
LIN54-206ENST00000506560 E2F8A0AVK6 867 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 SDR42E2A6NKP2 422 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 GOLGA8TH3BQL2 631 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 SEC24AO95486 1093 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 AP2A1O95782 977 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 MT-ND3P03897 115 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 HAPLN1P10915 354 aaPredicted RBP12.47□□□□□ -0.41
LIN54-206ENST00000506560 HOXC13P31276 330 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 SERPINB6P35237 376 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 MAGEA11P43364 429 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 CBLBQ13191 982 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 CRYMQ14894 314 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 PACS2Q86VP3 889 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 SPNS2Q8IVW8 549 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 ZNF683Q8IZ20 524 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 ZNF276Q8N554 614 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 APBB2Q92870 758 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 MFSD3Q96ES6 412 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 MAGEB18Q96M61 343 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 FRMD8Q9BZ67 464 aaPredicted RBP12.47□□□□□ -0.41
LIN54-206ENST00000506560 ATXN3LQ9H3M9 355 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 TLR6Q9Y2C9 796 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 SLC12A8A0AV02 714 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 FAM92AA1XBS5 289 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 SCAMP3O14828 347 aaKnown RBP12.47□□□□□ -0.41
LIN54-206ENST00000506560 SNX3O60493 162 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 CCNB1P14635 433 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 MX2P20592 715 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 LIG3P49916 1009 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 PAPOLAP51003 745 aaKnown RBP12.47□□□□□ -0.41
LIN54-206ENST00000506560 MSANTD2Q6P1R3 559 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 LRRC43Q8N309 656 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 ATPAF2Q8N5M1 289 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 AZIN2Q96A70 460 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 LRRC39Q96DD0 335 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 KLHL5Q96PQ7 755 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 FAM111AQ96PZ2 611 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 SLC13A1Q9BZW2 595 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 PRDM16Q9HAZ2 1276 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 EIF2B3Q9NR50 452 aaKnown RBP12.47□□□□□ -0.41
LIN54-206ENST00000506560 MARCH2Q9P0N8 246 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 MYLKQ15746 1914 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 J3KR12 359 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 RFPL1O75677 317 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 GJB3O75712 270 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 HLA-DQB2P05538 268 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 ALDH7A1P49419 539 aaKnown RBP12.47□□□□□ -0.41
LIN54-206ENST00000506560 PGGT1BP53609 377 aa12.47□□□□□ -0.41
LIN54-206ENST00000506560 DNAAF3Q8N9W5 541 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms