RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 FUKQ8N0W3 1084 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 ALLCQ8N6M5 410 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 BAHD1Q8TBE0 780 aaPredicted RBP6.13□□□□□ -1.43
SCLT1-207ENST00000506233 SNRNP27Q8WVK2 155 aaKnown RBP6.13□□□□□ -1.43
SCLT1-207ENST00000506233 C1orf54Q8WWF1 131 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 NLRP4Q96MN2 994 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 SPAG5Q96R06 1193 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 DNAI2Q9GZS0 605 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 CSNK1G1Q9HCP0 422 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 ASB14A6NK59 587 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 TUSC2O75896 110 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 LSM8O95777 96 aaKnown RBP6.13□□□□□ -1.43
SCLT1-207ENST00000506233 TRUB2O95900 331 aaKnown RBP6.13□□□□□ -1.43
SCLT1-207ENST00000506233 MMP13P45452 471 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 GCLCP48506 637 aaPredicted RBP6.13□□□□□ -1.43
SCLT1-207ENST00000506233 IRX3P78415 501 aaPredicted RBP6.13□□□□□ -1.43
SCLT1-207ENST00000506233 UBAP2LQ14157 1087 aaKnown RBP6.13□□□□□ -1.43
SCLT1-207ENST00000506233 MESDQ14696 234 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 UPP1Q16831 310 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 C15orf59Q2T9L4 293 aaPredicted RBP6.13□□□□□ -1.43
SCLT1-207ENST00000506233 TMEM177Q53S58 311 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 NPNTQ6UXI9 565 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 ARCQ7LC44 396 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 TLK2Q86UE8 772 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 RNF168Q8IYW5 571 aaPredicted RBP6.13□□□□□ -1.43
SCLT1-207ENST00000506233 PHACTR4Q8IZ21 702 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 CAMKK1Q8N5S9 505 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 BCL7CQ8WUZ0 217 aaPredicted RBP6.13□□□□□ -1.43
SCLT1-207ENST00000506233 NKD2Q969F2 451 aaPredicted RBP6.13□□□□□ -1.43
SCLT1-207ENST00000506233 ZFP42Q96MM3 310 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 CHCHD6Q9BRQ6 235 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 FAM204AQ9H8W3 233 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 CD248Q9HCU0 757 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 TIMMDC1Q9NPL8 285 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 RASSF1Q9NS23 344 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 HCSTQ9UBK5 93 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 ITGB1BP2Q9UKP3 347 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 AKT3Q9Y243 479 aa6.13□□□□□ -1.43
SCLT1-207ENST00000506233 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.12□□□□□ -1.43
SCLT1-207ENST00000506233 SPINT1O43278 529 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 AHCYL1O43865 530 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 RECQL4O94761 1208 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 HRGP04196 525 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 HSD3B1P14060 373 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 VAV1P15498 845 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 CD247P20963 164 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 CST5P28325 142 aaPredicted RBP6.12□□□□□ -1.43
SCLT1-207ENST00000506233 PIK3CAP42336 1068 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 MATR3P43243 847 aaKnown RBP eCLIP6.12□□□□□ -1.43
SCLT1-207ENST00000506233 RAD52P43351 418 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 CNGA2Q16280 664 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 SGSM1Q2NKQ1 1148 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 CCDC38Q502W7 563 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 KIAA1614Q5VZ46 1190 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 SLFN12LQ6IEE8 588 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 PEX26Q7Z412 305 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 CAND1Q86VP6 1230 aaKnown RBP6.12□□□□□ -1.43
SCLT1-207ENST00000506233 LIX1LQ8IVB5 337 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 UNC45BQ8IWX7 931 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 DNAJB3Q8WWF6 145 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 TMEM176AQ96HP8 235 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 MCEEQ96PE7 176 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 C11orf70Q9BRQ4 267 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 IMPG2Q9BZV3 1241 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 ZNHIT6Q9NWK9 470 aaKnown RBP6.12□□□□□ -1.43
SCLT1-207ENST00000506233 TMEFF2Q9UIK5 374 aaPredicted RBP6.12□□□□□ -1.43
SCLT1-207ENST00000506233 TRIM33Q9UPN9 1127 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 GPR55Q9Y2T6 319 aaPredicted RBP6.12□□□□□ -1.43
SCLT1-207ENST00000506233 MIA3Q5JRA6 1907 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 NRP1O14786 923 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 PSTPIP1O43586 416 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 DGKIO75912 1065 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 PEX11BO96011 259 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 ARRB2P32121 409 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 NDUFV1P49821 464 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 CDK7P50613 346 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 HNRNPH2P55795 449 aaKnown RBP6.12□□□□□ -1.43
SCLT1-207ENST00000506233 PPFIA1Q13136 1202 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 KCNJ11Q14654 390 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 LRRC38Q5VT99 294 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 ARHGAP17Q68EM7 881 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 FAM171BQ6P995 826 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 TMCO3Q6UWJ1 677 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 PDZD4Q76G19 769 aaPredicted RBP6.12□□□□□ -1.43
SCLT1-207ENST00000506233 ARMC9Q7Z3E5 817 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 EXOC3L1Q86VI1 746 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 ZNF410Q86VK4 478 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 THNSL1Q8IYQ7 743 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 TMEM151AQ8N4L1 468 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 PCDH19Q8TAB3 1148 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 CPT1BQ92523 772 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 PRCCQ92733 491 aaPredicted RBP6.12□□□□□ -1.43
SCLT1-207ENST00000506233 EXOC4Q96A65 974 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 ZNF653Q96CK0 615 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 OXNAD1Q96HP4 312 aaPredicted RBP6.12□□□□□ -1.43
SCLT1-207ENST00000506233 HHIPL1Q96JK4 782 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 ASB7Q9H672 318 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 CCDC134Q9H6E4 229 aa6.12□□□□□ -1.43
SCLT1-207ENST00000506233 RC3H2Q9HBD1 1191 aaKnown RBP6.12□□□□□ -1.43
SCLT1-207ENST00000506233 ANAPC7Q9UJX3 599 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms