RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 OXNAD1Q96HP4 312 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 RXFP1Q9HBX9 757 aa17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 NSMCE4AQ9NXX6 385 aa17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 TXNDC16Q9P2K2 825 aa17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 VANGL2Q9ULK5 521 aa17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 USH1CQ9Y6N9 552 aa17.68■□□□□ 0.42
TRAPPC11-204ENST00000505676 FAM237BA0A1B0GVD1 139 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 CARNS1A5YM72 827 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 CXorf49A8MYA2 514 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 MATN3O15232 486 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 ZBTB24O43167 697 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 DNAJC8O75937 253 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 CXCL10P02778 98 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 OR4Q2P0C623 313 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 TROVE2P10155 538 aaKnown RBP eCLIP17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 GRIA1P42261 906 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 NDST2P52849 883 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 SESN2P58004 480 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 CDH17Q12864 832 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 ZKSCAN8Q15776 578 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 FUT10Q6P4F1 479 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 LRRC43Q8N309 656 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 ZNF276Q8N554 614 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 ZNF296Q8WUU4 475 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 ATP2A3Q93084 1043 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 FCRL5Q96RD9 977 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 CPNE1Q99829 537 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 SLC12A4Q9UP95 1085 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 H0YHG0 523 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 DCTN3O75935 186 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 TGDSO95455 350 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 AMHP03971 560 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 CSH1P0DML2 217 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 CSH2P0DML3 217 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 ADRA1DP25100 572 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 CRHR1P34998 444 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 LIG3P49916 1009 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 TBX4P57082 545 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 TRIP4Q15650 581 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 GRTP1Q5TC63 336 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 TMEM135Q86UB9 458 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 MICALL1Q8N3F8 863 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 PTCD2Q8WV60 388 aaKnown RBP17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 IL12RB2Q99665 862 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 MANSC1Q9H8J5 431 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 NMUR1Q9HB89 426 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 SMYD2Q9NRG4 433 aa17.67■□□□□ 0.42
TRAPPC11-204ENST00000505676 E9PAM4 449 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 TBC1D4O60343 1298 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 RHOQP17081 205 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 CD68P34810 354 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 SKIV2L2P42285 1042 aaKnown RBP17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 GEMP55040 296 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 RING1Q06587 406 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 ZBTB17Q13105 803 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 TRMT10BQ6PF06 316 aaKnown RBP17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 KYAT3Q6YP21 454 aaKnown RBP17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 ARHGAP12Q8IWW6 846 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 CERS2Q96G23 380 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 SRPK1Q96SB4 655 aaKnown RBP17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 SIK2Q9H0K1 926 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 PAK6Q9NQU5 681 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 MARCH5Q9NX47 278 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 SYBUQ9NX95 663 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 PLLPQ9Y342 182 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 CFAP73A6NFT4 308 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 BIRC5O15392 142 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 RFPL1O75677 317 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 CCNB1P14635 433 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 CPB1P15086 417 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 NFKB1P19838 968 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 GP5P40197 560 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 HADHAP40939 763 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 SCTRP47872 440 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 SLC11A1P49279 550 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 GPNMBQ14956 572 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 SETDB1Q15047 1291 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 CRIPAKQ8N1N5 446 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 DNAAF3Q8N9W5 541 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 ZSCAN18Q8TBC5 510 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 FBXO32Q969P5 355 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 BTN2A3PQ96KV6 586 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 ZFATQ9P243 1243 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 SFMBT1Q9UHJ3 866 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 GRID1Q9ULK0 1009 aa17.66■□□□□ 0.42
TRAPPC11-204ENST00000505676 MYO16Q9Y6X6 1858 aa17.65■□□□□ 0.42
TRAPPC11-204ENST00000505676 MTMR11A4FU01 709 aa17.65■□□□□ 0.42
TRAPPC11-204ENST00000505676 ATP5HO75947 161 aa17.65■□□□□ 0.42
TRAPPC11-204ENST00000505676 HAPLN1P10915 354 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC11-204ENST00000505676 TUBP50607 506 aa17.65■□□□□ 0.42
TRAPPC11-204ENST00000505676 INSCQ1MX18 579 aa17.65■□□□□ 0.42
TRAPPC11-204ENST00000505676 ATG16L1Q676U5 607 aa17.65■□□□□ 0.42
TRAPPC11-204ENST00000505676 PACS1Q6VY07 963 aa17.65■□□□□ 0.42
TRAPPC11-204ENST00000505676 UMODL1-AS1Q8N2C9 162 aa17.65■□□□□ 0.42
TRAPPC11-204ENST00000505676 OVCA2Q8WZ82 227 aa17.65■□□□□ 0.42
TRAPPC11-204ENST00000505676 AGAP3Q96P47 875 aa17.65■□□□□ 0.42
TRAPPC11-204ENST00000505676 GORASP1Q9BQQ3 440 aa17.65■□□□□ 0.42
TRAPPC11-204ENST00000505676 HSFX1Q9UBD0 423 aa17.65■□□□□ 0.42
TRAPPC11-204ENST00000505676 OGDHLQ9ULD0 1010 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 305.5 ms