RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 SEMA6DQ8NFY4 1073 aa3.56□□□□□ -1.84
RFC1-209ENST00000504974 PNISRQ8TF01 805 aaKnown RBP3.56□□□□□ -1.84
RFC1-209ENST00000504974 KAT2BQ92831 832 aa3.56□□□□□ -1.84
RFC1-209ENST00000504974 KTI12Q96EK9 354 aaPredicted RBP3.56□□□□□ -1.84
RFC1-209ENST00000504974 ADAD1Q96M93 576 aaKnown RBP3.56□□□□□ -1.84
RFC1-209ENST00000504974 HERC2P3Q9BVR0 1158 aa3.56□□□□□ -1.84
RFC1-209ENST00000504974 SCNM1Q9BWG6 230 aa3.56□□□□□ -1.84
RFC1-209ENST00000504974 TM2D2Q9BX73 214 aa3.56□□□□□ -1.84
RFC1-209ENST00000504974 HDHD5Q9BXW7 423 aa3.56□□□□□ -1.84
RFC1-209ENST00000504974 TRIM31Q9BZY9 425 aa3.56□□□□□ -1.84
RFC1-209ENST00000504974 TWSG1Q9GZX9 223 aa3.56□□□□□ -1.84
RFC1-209ENST00000504974 SEMA5BQ9P283 1151 aa3.56□□□□□ -1.84
RFC1-209ENST00000504974 LRRFIP2Q9Y608 721 aaKnown RBP3.56□□□□□ -1.84
RFC1-209ENST00000504974 COX11Q9Y6N1 276 aa3.56□□□□□ -1.84
RFC1-209ENST00000504974 COL11A2P13942 1736 aaPredicted RBP3.56□□□□□ -1.84
RFC1-209ENST00000504974 KDM5BQ9UGL1 1544 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 WDR7Q9Y4E6 1490 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 EMSYQ7Z589 1322 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 WDR17Q8IZU2 1322 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 CYP3A7-CYP3A51PA0A087WV96 503 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 PEX12O00623 359 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 DSCR3O14972 297 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 SYN3O14994 580 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 KLK10O43240 276 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 ANP32CO43423 234 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 TOM1O60784 492 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 PLAUP00749 431 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 RFPL3SP0C7P2 107 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 TGM2P21980 687 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 CYP3A7P24462 503 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 PNPLA4P41247 253 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 ZNF84P51523 738 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 UBE3AQ05086 875 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 SLC10A2Q12908 348 aaPredicted RBP3.55□□□□□ -1.84
RFC1-209ENST00000504974 HNRNPA0Q13151 305 aaKnown RBP3.55□□□□□ -1.84
RFC1-209ENST00000504974 ALKBH1Q13686 389 aaKnown RBP3.55□□□□□ -1.84
RFC1-209ENST00000504974 DLGAP5Q15398 846 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 ALFQ53S48 1182 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 CEP78Q5JTW2 689 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 LIPMQ5VYY2 423 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 ZNF66Q6ZN08 573 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 RBM44Q6ZP01 1051 aaKnown RBP3.55□□□□□ -1.84
RFC1-209ENST00000504974 PTF1AQ7RTS3 328 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 RNF144BQ7Z419 303 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 ANKS1BQ7Z6G8 1248 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 TMEM200AQ86VY9 491 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 ADGRF4Q8IZF3 695 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 PTGR2Q8N8N7 351 aaPredicted RBP3.55□□□□□ -1.84
RFC1-209ENST00000504974 C8orf58Q8NAV2 365 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 MAP4K1Q92918 833 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 USP13Q92995 863 aaPredicted RBP3.55□□□□□ -1.84
RFC1-209ENST00000504974 MAELQ96JY0 434 aaKnown RBP3.55□□□□□ -1.84
RFC1-209ENST00000504974 ADARB2Q9NS39 739 aaKnown RBP3.55□□□□□ -1.84
RFC1-209ENST00000504974 ARL15Q9NXU5 204 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 MTMR4Q9NYA4 1195 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 GGA3Q9NZ52 723 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 IFT80Q9P2H3 777 aaPredicted RBP3.55□□□□□ -1.84
RFC1-209ENST00000504974 IPO11Q9UI26 975 aaKnown RBP3.55□□□□□ -1.84
RFC1-209ENST00000504974 FBXO4Q9UKT5 387 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 RAPGEF6Q8TEU7 1601 aa3.55□□□□□ -1.84
RFC1-209ENST00000504974 ARAP3Q8WWN8 1544 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 PTPRTO14522 1441 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 SLC22A23A1A5C7 686 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 NFATC1O95644 943 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 WEE2P0C1S8 567 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 IGFBP2P18065 325 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 PRPH2P23942 346 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 GSTM2P28161 218 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 EPHB2P29323 1055 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 GOLGA8FQ08AF8 430 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 GXYLT1Q4G148 440 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 ZKSCAN2Q63HK3 967 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 ZNF813Q6ZN06 617 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.54□□□□□ -1.84
RFC1-209ENST00000504974 CPOQ8IVL8 374 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 ENDOVQ8N8Q3 282 aaKnown RBP3.54□□□□□ -1.84
RFC1-209ENST00000504974 IP6K1Q92551 441 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 DPF1Q92782 380 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 EVI5LQ96CN4 794 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 TWNKQ96RR1 684 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 ZNF347Q96SE7 839 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 TLR8Q9NR97 1041 aaKnown RBP3.54□□□□□ -1.84
RFC1-209ENST00000504974 THAP1Q9NVV9 213 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 KLQ9UEF7 1012 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 PCSK5Q92824 1860 aa3.54□□□□□ -1.84
RFC1-209ENST00000504974 FHOD3Q2V2M9 1422 aa3.53□□□□□ -1.84
RFC1-209ENST00000504974 STRCQ7RTU9 1775 aa3.53□□□□□ -1.84
RFC1-209ENST00000504974 CFAP43Q8NDM7 1665 aa3.53□□□□□ -1.84
RFC1-209ENST00000504974 TCRBV7S3A2A0A539 114 aa3.53□□□□□ -1.84
RFC1-209ENST00000504974 VWA3AA6NCI4 1184 aa3.53□□□□□ -1.84
RFC1-209ENST00000504974 CXorf65A6NEN9 183 aa3.53□□□□□ -1.84
RFC1-209ENST00000504974 NPIPB13A6NJU9 1138 aa3.53□□□□□ -1.84
RFC1-209ENST00000504974 NPIPB5A8MRT5 1133 aa3.53□□□□□ -1.84
RFC1-209ENST00000504974 NPIPB4C9JG80 1138 aa3.53□□□□□ -1.84
RFC1-209ENST00000504974 MCIDASD6RGH6 385 aa3.53□□□□□ -1.84
RFC1-209ENST00000504974 MSI1O43347 362 aaKnown RBP3.53□□□□□ -1.84
RFC1-209ENST00000504974 CCNT1O60563 726 aaKnown RBP3.53□□□□□ -1.84
RFC1-209ENST00000504974 UGDHO60701 494 aa3.53□□□□□ -1.84
RFC1-209ENST00000504974 CD63P08962 238 aa3.53□□□□□ -1.84
RFC1-209ENST00000504974 CYP4B1P13584 511 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms