RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 BTBD3Q9Y2F9 522 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 CEP83Q9Y592 693 aa13.19□□□□□ -0.3
RNF4-206ENST00000504782 DOCK4Q8N1I0 1966 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 EDDM13A0A1B0GTR0 161 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 M0QYT0 321 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 PAGE1O75459 146 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 RNASEH2AO75792 299 aaKnown RBP13.18□□□□□ -0.3
RNF4-206ENST00000504782 CNTN5O94779 1100 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 WNT1P04628 370 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 CYP11B1P15538 503 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 ERCC5P28715 1186 aaPredicted RBP13.18□□□□□ -0.3
RNF4-206ENST00000504782 SLC8A1P32418 973 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 MATKP42679 507 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 PSMD8P48556 350 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 TTC31Q49AM3 519 aaPredicted RBP13.18□□□□□ -0.3
RNF4-206ENST00000504782 PRAMEF14Q5SWL7 426 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 KIAA0895LQ68EN5 471 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 NCEH1Q6PIU2 408 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 SLC26A9Q7LBE3 791 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 NOP9Q86U38 636 aaKnown RBP13.18□□□□□ -0.3
RNF4-206ENST00000504782 SLCO6A1Q86UG4 719 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 CCDC117Q8IWD4 279 aaPredicted RBP13.18□□□□□ -0.3
RNF4-206ENST00000504782 ZNF397Q8NF99 534 aaPredicted RBP13.18□□□□□ -0.3
RNF4-206ENST00000504782 SETD7Q8WTS6 366 aaKnown RBP13.18□□□□□ -0.3
RNF4-206ENST00000504782 FRS2Q8WU20 508 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 RPRD1AQ96P16 312 aaPredicted RBP13.18□□□□□ -0.3
RNF4-206ENST00000504782 NPY6RQ99463 290 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 ZDHHC5Q9C0B5 715 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 SIK2Q9H0K1 926 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 PCED1AQ9H1Q7 454 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 SGK2Q9HBY8 427 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 TM7SF3Q9NS93 570 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 TAB2Q9NYJ8 693 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 SLC12A6Q9UHW9 1150 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 PCOLCE2Q9UKZ9 415 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 SARDHQ9UL12 918 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 ZMIZ1Q9ULJ6 1067 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 ANKRD6Q9Y2G4 727 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 OR51B4Q9Y5P0 310 aa13.18□□□□□ -0.3
RNF4-206ENST00000504782 A0A1B0GVM2 712 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 TARSL2A2RTX5 802 aaKnown RBP13.17□□□□□ -0.3
RNF4-206ENST00000504782 TCAF2A6NFQ2 919 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 C10orf142B7Z368 130 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 RNF103O00237 685 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 PES1O00541 588 aaKnown RBP13.17□□□□□ -0.3
RNF4-206ENST00000504782 MOCS3O95396 460 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 FTH1P19P0C7X4 201 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 SLC2A3P11169 496 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 CD27P26842 260 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 CDH5P33151 784 aaPredicted RBP13.17□□□□□ -0.3
RNF4-206ENST00000504782 NOS2P35228 1153 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 AFF3P51826 1226 aaKnown RBP13.17□□□□□ -0.3
RNF4-206ENST00000504782 PLK1P53350 603 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 IL9RQ01113 521 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 RAB6CQ53S08 254 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 ALFQ53S48 1182 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 TCP11X2Q5H9J9 407 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 DBX2Q6ZNG2 339 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 USP30Q70CQ3 517 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 RAB44Q7Z6P3 723 aaPredicted RBP13.17□□□□□ -0.3
RNF4-206ENST00000504782 XYLT1Q86Y38 959 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 FAM114A1Q8IWE2 563 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 ZNF683Q8IZ20 524 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 KDM1BQ8NB78 822 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 SLC6A18Q96N87 628 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 NOX5Q96PH1 765 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 TBCBQ99426 244 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 OMDQ99983 421 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 FEM1AQ9BSK4 669 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 RAB6CQ9H0N0 254 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 SYNCQ9H7C4 482 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 NCKAP1Q9Y2A7 1128 aa13.17□□□□□ -0.3
RNF4-206ENST00000504782 H0Y8X5 98 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 EPHB6O15197 1021 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 RNASEH1O60930 286 aaKnown RBP13.16□□□□□ -0.3
RNF4-206ENST00000504782 CER1O95813 267 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 MT-CO1P00395 513 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 IL1BP01584 269 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 MMEP08473 750 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 UCHL3P15374 230 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 DRD3P35462 400 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 FLT3P36888 993 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 GABRB2P47870 512 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 GRIA4P48058 902 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 CXCR3P49682 368 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 SULT1E1P49888 294 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 POM121L1PQ3SYA9 428 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 RABGAP1LQ5R372 815 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 RNF219Q5W0B1 726 aaPredicted RBP13.16□□□□□ -0.3
RNF4-206ENST00000504782 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.16□□□□□ -0.3
RNF4-206ENST00000504782 PHLDB2Q86SQ0 1253 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 MARCH9Q86YJ5 346 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 KDF1Q8NAX2 398 aaPredicted RBP13.16□□□□□ -0.3
RNF4-206ENST00000504782 BAHD1Q8TBE0 780 aaPredicted RBP13.16□□□□□ -0.3
RNF4-206ENST00000504782 GPT2Q8TD30 523 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 SLC20A1Q8WUM9 679 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 CPA5Q8WXQ8 436 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 NT5C3BQ969T7 300 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 PSMB7Q99436 277 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 TKTL2Q9H0I9 626 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms