RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 EML5Q05BV3 1969 aa8.28□□□□□ -1.08
RFC1-207ENST00000504554 FAM186AA6NE01 2351 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 IGHV1OR15-9A0A0B4J2B8 117 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 A0A1B0GTH6 734 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 SMTNL1A8MU46 457 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 M0QYT0 321 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 ERVH48-1M5A8F1 160 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 PAGE1O75459 146 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 CNTN5O94779 1100 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 TPM2P07951 284 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 MMP8P22894 467 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 GBP1P32455 592 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 PTGER3P43115 390 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 CXCR3P49682 368 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 SULT1E1P49888 294 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 CENPCQ03188 943 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 NR1I3Q14994 352 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 CLEC16AQ2KHT3 1053 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 USP39Q53GS9 565 aaKnown RBP8.27□□□□□ -1.09
RFC1-207ENST00000504554 MPP7Q5T2T1 576 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 SH3PXD2AQ5TCZ1 1133 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 CXorf57Q6NSI4 855 aaKnown RBP8.27□□□□□ -1.09
RFC1-207ENST00000504554 TRMT11Q7Z4G4 463 aaKnown RBP8.27□□□□□ -1.09
RFC1-207ENST00000504554 IRF2BP2Q7Z5L9 587 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 CHSY1Q86X52 802 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 ZNF677Q86XU0 584 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 ZDHHC17Q8IUH5 632 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 MFN1Q8IWA4 741 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 TMEFF1Q8IYR6 380 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 ZNF683Q8IZ20 524 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 APCDD1Q8J025 514 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 PGBD3Q8N328 593 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 CARNMT1Q8N4J0 409 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 HJURPQ8NCD3 748 aaPredicted RBP8.27□□□□□ -1.09
RFC1-207ENST00000504554 JOSD2Q8TAC2 188 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 FIBINQ8TAL6 211 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 BTN2A3PQ96KV6 586 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 CFAP57Q96MR6 1250 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 SPAG5Q96R06 1193 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 C11orf70Q9BRQ4 267 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 SYT11Q9BT88 431 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 TTYH3Q9C0H2 523 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 TMEM245Q9H330 911 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 SYNCQ9H7C4 482 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 METTL5Q9NRN9 209 aaKnown RBP8.27□□□□□ -1.09
RFC1-207ENST00000504554 TMEM74BQ9NUR3 256 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 ARHGEF38Q9NXL2 777 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 TAS2R14Q9NYV8 317 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.27□□□□□ -1.091e-9■■□□□ 11.4
RFC1-207ENST00000504554 USP18Q9UMW8 372 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 CYP8B1Q9UNU6 501 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 CEP83Q9Y592 693 aa8.27□□□□□ -1.09
RFC1-207ENST00000504554 PTPRZ1P23471 2315 aaPredicted RBP8.27□□□□□ -1.09
RFC1-207ENST00000504554 MUC22E2RYF6 1773 aaPredicted RBP8.26□□□□□ -1.09
RFC1-207ENST00000504554 TCRBV5S1A1TA0A578 114 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 BCLAF3A2AJT9 711 aaKnown RBP8.26□□□□□ -1.09
RFC1-207ENST00000504554 PATE3B3GLJ2 98 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 ALDH1A2O94788 518 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 LUC7L3O95232 432 aaKnown RBP8.26□□□□□ -1.09
RFC1-207ENST00000504554 APOEP02649 317 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 EPHX1P07099 455 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 MZF1P28698 734 aaPredicted RBP8.26□□□□□ -1.09
RFC1-207ENST00000504554 CCR1P32246 355 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 SCNN1AP37088 669 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 MPLP40238 635 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 PBX1P40424 430 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 CSKP41240 450 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 ZNF445P59923 1031 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 AUHQ13825 339 aaKnown RBP8.26□□□□□ -1.09
RFC1-207ENST00000504554 EIF4HQ15056 248 aaKnown RBP8.26□□□□□ -1.09
RFC1-207ENST00000504554 CSRP2Q16527 193 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 RSPO4Q2I0M5 234 aaPredicted RBP8.26□□□□□ -1.09
RFC1-207ENST00000504554 C15orf59Q2T9L4 293 aaPredicted RBP8.26□□□□□ -1.09
RFC1-207ENST00000504554 ZSCAN23Q3MJ62 389 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 SLC25A52Q3SY17 297 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 CCDC14Q49A88 953 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 ALFQ53S48 1182 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 PITRM1Q5JRX3 1037 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 KIAA1324Q6UXG2 1013 aaKnown RBP8.26□□□□□ -1.09
RFC1-207ENST00000504554 PRR23CQ6ZRP0 262 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 ARMCX6Q7L4S7 300 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 CACUL1Q86Y37 369 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 SLC41A1Q8IVJ1 513 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 AHI1Q8N157 1196 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 CCAR2Q8N163 923 aaKnown RBP8.26□□□□□ -1.09
RFC1-207ENST00000504554 ATP6V0D2Q8N8Y2 350 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 ANKRD20A12PQ8NF67 263 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 WFIKKN2Q8TEU8 576 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 RNF34Q969K3 372 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 TTC17Q96AE7 1141 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 ALG14Q96F25 216 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 PGAP3Q96FM1 320 aaPredicted RBP8.26□□□□□ -1.09
RFC1-207ENST00000504554 LOXL4Q96JB6 756 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 AGPAT1Q99943 283 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 TRIM62Q9BVG3 475 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 NAT10Q9H0A0 1025 aaKnown RBP8.26□□□□□ -1.09
RFC1-207ENST00000504554 TKTL2Q9H0I9 626 aa8.26□□□□□ -1.09
RFC1-207ENST00000504554 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.26□□□□□ -1.09
RFC1-207ENST00000504554 VANGL2Q9ULK5 521 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms