RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 JCHAINP01591 159 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 MT-ND3P03897 115 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 FOXN2P32314 431 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 CRADDP78560 199 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 SLC18A2Q05940 514 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 EFEMP1Q12805 493 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 NUGGCQ68CJ6 796 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 SLC8B1Q6J4K2 584 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 CNKSR3Q6P9H4 555 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 ARHGAP36Q6ZRI8 547 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 RTL3Q8N8U3 475 aaKnown RBP21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 FBXO22Q8NEZ5 403 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 TGS1Q96RS0 853 aaKnown RBP21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 MLPHQ9BV36 600 aaPredicted RBP21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 SLC39A8Q9C0K1 460 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 NDFIP2Q9NV92 336 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 MTRRQ9UBK8 725 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 CDY1Q9Y6F8 540 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 UPP2O95045 317 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 ZWINTO95229 277 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 TBX18O95935 607 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 ZDHHC11BP0C7U3 371 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 CSH1P0DML2 217 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 CSH2P0DML3 217 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 PGAM1P18669 254 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 NFKB1P19838 968 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 TAC1P20366 129 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 GBP2P32456 591 aaPredicted RBP21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 ALDH7A1P49419 539 aaKnown RBP21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 RPL10AP62906 217 aaKnown RBP21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 IKBKEQ14164 716 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 TRIP4Q15650 581 aaPredicted RBP21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 CNTD1Q8N815 330 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 SERAC1Q96JX3 654 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 BEGAINQ9BUH8 593 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 VN1R3Q9BXE9 311 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 CASS4Q9NQ75 786 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 PIH1D1Q9NWS0 290 aaKnown RBP21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 SYBUQ9NX95 663 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 FNIP2Q9P278 1114 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 GRID1Q9ULK0 1009 aa21.85■■□□□ 1.09
UBE2D3-216ENST00000503742 DFFAO00273 331 aa21.84■■□□□ 1.09
UBE2D3-216ENST00000503742 ADAM12O43184 909 aa21.84■■□□□ 1.09
UBE2D3-216ENST00000503742 MAFKO60675 156 aa21.84■■□□□ 1.09
UBE2D3-216ENST00000503742 USP41Q3LFD5 358 aa21.84■■□□□ 1.09
UBE2D3-216ENST00000503742 YTHDF3Q7Z739 585 aaKnown RBP21.84■■□□□ 1.09
UBE2D3-216ENST00000503742 ATPAF2Q8N5M1 289 aa21.84■■□□□ 1.09
UBE2D3-216ENST00000503742 TTC17Q96AE7 1141 aa21.84■■□□□ 1.09
UBE2D3-216ENST00000503742 PRDM5Q9NQX1 630 aaPredicted RBP21.84■■□□□ 1.09
UBE2D3-216ENST00000503742 DOCK4Q8N1I0 1966 aa21.84■■□□□ 1.09
UBE2D3-216ENST00000503742 NYNRINQ9P2P1 1898 aaKnown RBP21.84■■□□□ 1.09
UBE2D3-216ENST00000503742 ARHGAP42A6NI28 874 aa21.83■■□□□ 1.09
UBE2D3-216ENST00000503742 UGT1A9O60656 530 aa21.83■■□□□ 1.09
UBE2D3-216ENST00000503742 ATF6P18850 670 aa21.83■■□□□ 1.09
UBE2D3-216ENST00000503742 OLIG2Q13516 323 aa21.83■■□□□ 1.09
UBE2D3-216ENST00000503742 CASC4Q6P4E1 433 aa21.83■■□□□ 1.09
UBE2D3-216ENST00000503742 RGS9BPQ6ZS82 235 aa21.83■■□□□ 1.09
UBE2D3-216ENST00000503742 OR52K1Q8NGK4 314 aa21.83■■□□□ 1.09
UBE2D3-216ENST00000503742 KLF6Q99612 283 aaPredicted RBP21.83■■□□□ 1.09
UBE2D3-216ENST00000503742 IL12RB2Q99665 862 aa21.83■■□□□ 1.09
UBE2D3-216ENST00000503742 TTLL2Q9BWV7 592 aa21.83■■□□□ 1.09
UBE2D3-216ENST00000503742 UGT1A7Q9HAW7 530 aa21.83■■□□□ 1.09
UBE2D3-216ENST00000503742 UGT1A10Q9HAW8 530 aa21.83■■□□□ 1.09
UBE2D3-216ENST00000503742 UGT1A8Q9HAW9 530 aa21.83■■□□□ 1.09
UBE2D3-216ENST00000503742 FGFR1OP2Q9NVK5 253 aa21.83■■□□□ 1.09
UBE2D3-216ENST00000503742 MPP6Q9NZW5 540 aa21.83■■□□□ 1.09
UBE2D3-216ENST00000503742 BACE2Q9Y5Z0 518 aa21.83■■□□□ 1.09
UBE2D3-216ENST00000503742 TM9SF1O15321 606 aa21.83■■□□□ 1.08
UBE2D3-216ENST00000503742 KRT37O76014 449 aa21.83■■□□□ 1.08
UBE2D3-216ENST00000503742 IGLV3-27P01718 113 aa21.83■■□□□ 1.08
UBE2D3-216ENST00000503742 SNRPAP09012 282 aaKnown RBP21.83■■□□□ 1.08
UBE2D3-216ENST00000503742 MS4A13Q5J8X5 152 aa21.83■■□□□ 1.08
UBE2D3-216ENST00000503742 CCDC197Q8NCU1 140 aa21.83■■□□□ 1.08
UBE2D3-216ENST00000503742 IGSF21Q96ID5 467 aa21.83■■□□□ 1.08
UBE2D3-216ENST00000503742 CABS1Q96KC9 395 aa21.83■■□□□ 1.08
UBE2D3-216ENST00000503742 ELAC2Q9BQ52 826 aaKnown RBP21.83■■□□□ 1.08
UBE2D3-216ENST00000503742 MARCH2Q9P0N8 246 aa21.83■■□□□ 1.08
UBE2D3-216ENST00000503742 SAMD15Q9P1V8 674 aa21.83■■□□□ 1.08
UBE2D3-216ENST00000503742 PPARGC1AQ9UBK2 798 aaKnown RBP21.83■■□□□ 1.08
UBE2D3-216ENST00000503742 SLC38A8A6NNN8 435 aa21.82■■□□□ 1.08
UBE2D3-216ENST00000503742 TRIM49D1C9J1S8 452 aa21.82■■□□□ 1.08
UBE2D3-216ENST00000503742 GOLGA8RI6L899 631 aa21.82■■□□□ 1.08
UBE2D3-216ENST00000503742 MATN3O15232 486 aa21.82■■□□□ 1.08
UBE2D3-216ENST00000503742 SNX3O60493 162 aa21.82■■□□□ 1.08
UBE2D3-216ENST00000503742 OAS1P00973 400 aaKnown RBP21.82■■□□□ 1.08
UBE2D3-216ENST00000503742 CCNB1P14635 433 aa21.82■■□□□ 1.08
UBE2D3-216ENST00000503742 NIPAL4Q0D2K0 466 aa21.82■■□□□ 1.08
UBE2D3-216ENST00000503742 IFT88Q13099 833 aa21.82■■□□□ 1.08
UBE2D3-216ENST00000503742 CRYMQ14894 314 aa21.82■■□□□ 1.08
UBE2D3-216ENST00000503742 LGSNQ5TDP6 509 aa21.82■■□□□ 1.08
UBE2D3-216ENST00000503742 LRRC49Q8IUZ0 686 aa21.82■■□□□ 1.08
UBE2D3-216ENST00000503742 ATP6V0D2Q8N8Y2 350 aa21.82■■□□□ 1.08
UBE2D3-216ENST00000503742 TCP10LQ8TDR4 215 aa21.82■■□□□ 1.08
UBE2D3-216ENST00000503742 DIS3LQ8TF46 1054 aaKnown RBP21.82■■□□□ 1.08
UBE2D3-216ENST00000503742 BTN2A3PQ96KV6 586 aa21.82■■□□□ 1.08
UBE2D3-216ENST00000503742 CEP295NLQ96MC4 621 aa21.82■■□□□ 1.08
UBE2D3-216ENST00000503742 PAIP2Q9BPZ3 127 aaKnown RBP21.82■■□□□ 1.08
UBE2D3-216ENST00000503742 IGLV3-10A0A075B6K4 115 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 NEK3P51956 506 aa21.81■■□□□ 1.08
UBE2D3-216ENST00000503742 CORO7P57737 925 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms