RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 DNM1P46Q6ZS02 220 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 MON1BQ7L1V2 547 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 HORMAD1Q86X24 394 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 DCP2Q8IU60 420 aaKnown RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 UMODL1-AS1Q8N2C9 162 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 KIF2BQ8N4N8 673 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 WDTC1Q8N5D0 677 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 SPERTQ8NA61 448 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 IL17RCQ8NAC3 791 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 TP53INP1Q96A56 240 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 TMA16Q96EY4 203 aaKnown RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 CDCA5Q96FF9 252 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 DYDC2Q96IM9 177 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 PRICKLE1Q96MT3 831 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 FAM161BQ96MY7 647 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 NUDT12Q9BQG2 462 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 BEGAINQ9BUH8 593 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 MRPL1Q9BYD6 325 aaKnown RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ADAM33Q9BZ11 813 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 PNPLA3Q9NST1 481 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ATPIF1Q9UII2 106 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ACAD8Q9UKU7 415 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 DNM3Q9UQ16 869 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 EXOC1LA0A1B0GW35 172 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 SIGLEC16A6NMB1 481 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 CCNT2O60583 730 aaKnown RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ENTPD5O75356 428 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 FAM153BP0C7A2 387 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 GSTT2P0CG29 244 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 GSTT2BP0CG30 244 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 NAA20P61599 178 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 MAPRE2Q15555 327 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 FAM153CQ494X1 144 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ACSBG2Q5FVE4 666 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 EFCAB12Q6NXP0 572 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 NHLRC1Q6VVB1 395 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 FKBP9P1Q75LS8 142 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ATP6V0D2Q8N8Y2 350 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 GIPC2Q8TF65 315 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 SLC35F5Q8WV83 523 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 SYMPKQ92797 1274 aaKnown RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ATP2A3Q93084 1043 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 DHRS1Q96LJ7 313 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ZHX3Q9H4I2 956 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 DDX18Q9NVP1 670 aaKnown RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 PPARGC1AQ9UBK2 798 aaKnown RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 FAM153AQ9UHL3 310 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 GGA1Q9UJY5 639 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 PHTF1Q9UMS5 762 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 COMMD10Q9Y6G5 202 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 C2orf16Q68DN1 1984 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 POTEB3A0JP26 581 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 SMIM23A6NLE4 172 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 DRGXA6NNA5 263 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 KCNU1A8MYU2 1149 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 B2RBV5 119 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 H3BMH7 237 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 RIPK2O43353 540 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 PABPC1P11940 636 aaKnown RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 PCNAP12004 261 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 KRT13P13646 458 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 GRK2P25098 689 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 CYP2C18P33260 490 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 TXKP42681 527 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 PRCPP42785 496 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 CRKP46108 304 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 INHBCP55103 352 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 TRAP1Q12931 704 aaKnown RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 PTGDRQ13258 359 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 C16orf72Q14CZ0 275 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 PDK3Q15120 406 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 WDR72Q3MJ13 1102 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 FAXCQ5TGI0 409 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 KAZNQ674X7 775 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 OTUD7BQ6GQQ9 843 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 POTEBQ6S5H4 581 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 TRABD2AQ86V40 505 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ZDHHC17Q8IUH5 632 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ZFPM1Q8IX07 1006 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 OXR1Q8N573 874 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ANKRD42Q8N9B4 389 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 PHC3Q8NDX5 983 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 GPR150Q8NGU9 434 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ANGPTL6Q8NI99 470 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 SUN5Q8TC36 379 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 KBTBD7Q8WVZ9 684 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 CYTH2Q99418 400 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 OSBPL11Q9BXB4 747 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 GON7Q9BXV9 100 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 AGO4Q9HCK5 861 aaKnown RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 LRRK1Q38SD2 2015 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 LRRC53A6NM62 1247 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 TMEM114B3SHH9 223 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 CLDN25C9JDP6 229 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 USP17L12C9JPN9 530 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 USP17L21D6R901 530 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 PPEF1O14829 653 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-204ENST00000503468 GPR37O15354 613 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 USP17L8P0C7I0 530 aa2.85□□□□□ -1.95
NEDD4-204ENST00000503468 ZCCHC18P0CG32 403 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms