RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 PLEKHG6Q3KR16 790 aa16.95■□□□□ 0.3
SCLT1-205ENST00000503401 BOLA3Q53S33 107 aa16.95■□□□□ 0.3
SCLT1-205ENST00000503401 CHPFQ8IZ52 775 aa16.95■□□□□ 0.3
SCLT1-205ENST00000503401 MUC3BQ9H195 1237 aa16.95■□□□□ 0.3
SCLT1-205ENST00000503401 ADGRG1Q9Y653 693 aa16.95■□□□□ 0.3
SCLT1-205ENST00000503401 MUC22E2RYF6 1773 aaPredicted RBP16.94■□□□□ 0.3
SCLT1-205ENST00000503401 A0A0A6YYK5 440 aaPredicted RBP16.94■□□□□ 0.3
SCLT1-205ENST00000503401 CHURC1-FNTBB4DL54 471 aa16.94■□□□□ 0.3
SCLT1-205ENST00000503401 EEF2KO00418 725 aaKnown RBP16.94■□□□□ 0.3
SCLT1-205ENST00000503401 TNNT1P13805 278 aa16.94■□□□□ 0.3
SCLT1-205ENST00000503401 RHOQP17081 205 aa16.94■□□□□ 0.3
SCLT1-205ENST00000503401 POLR2EP19388 210 aaKnown RBP16.94■□□□□ 0.3
SCLT1-205ENST00000503401 COMTP21964 271 aa16.94■□□□□ 0.3
SCLT1-205ENST00000503401 NAP1L1P55209 391 aaKnown RBP16.94■□□□□ 0.3
SCLT1-205ENST00000503401 ZNF234Q14588 700 aa16.94■□□□□ 0.3
SCLT1-205ENST00000503401 EIF4HQ15056 248 aaKnown RBP16.94■□□□□ 0.3
SCLT1-205ENST00000503401 HADHQ16836 314 aaKnown RBP16.94■□□□□ 0.3
SCLT1-205ENST00000503401 MAML2Q8IZL2 1156 aaPredicted RBP16.94■□□□□ 0.3
SCLT1-205ENST00000503401 CCDC26Q8TAB7 109 aa16.94■□□□□ 0.3
SCLT1-205ENST00000503401 UCMAQ8WVF2 138 aa16.94■□□□□ 0.3
SCLT1-205ENST00000503401 ALG14Q96F25 216 aa16.94■□□□□ 0.3
SCLT1-205ENST00000503401 FEM1AQ9BSK4 669 aa16.94■□□□□ 0.3
SCLT1-205ENST00000503401 CWC15Q9P013 229 aaKnown RBP16.94■□□□□ 0.3
SCLT1-205ENST00000503401 LCMT1Q9UIC8 334 aa16.94■□□□□ 0.3
SCLT1-205ENST00000503401 PJA2O43164 708 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 LAMTOR5O43504 91 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 GALR2O43603 387 aaPredicted RBP16.93■□□□□ 0.3
SCLT1-205ENST00000503401 ATG13O75143 517 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 CD48P09326 243 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 HNRNPLP14866 589 aaKnown RBP eCLIP16.93■□□□□ 0.3
SCLT1-205ENST00000503401 IL12RB1P42701 662 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 CXCL12P48061 93 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 HADHBP55084 474 aaKnown RBP16.93■□□□□ 0.3
SCLT1-205ENST00000503401 DMC1Q14565 340 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 DPYSL2Q16555 572 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 PTPRNQ16849 979 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 C6orf118Q5T5N4 469 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 TMEM92Q6UXU6 159 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 SETD3Q86TU7 594 aaPredicted RBP16.93■□□□□ 0.3
SCLT1-205ENST00000503401 PSTKQ8IV42 348 aaKnown RBP16.93■□□□□ 0.3
SCLT1-205ENST00000503401 ZNF366Q8N895 744 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 OR7D4Q8NG98 312 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 TPCN2Q8NHX9 752 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 TEKT4Q8WW24 435 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 PDLIM2Q96JY6 352 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 RPL10LQ96L21 214 aaKnown RBP16.93■□□□□ 0.3
SCLT1-205ENST00000503401 ZNF830Q96NB3 372 aaPredicted RBP16.93■□□□□ 0.3
SCLT1-205ENST00000503401 TMEM248Q9NWD8 314 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 THAP10Q9P2Z0 257 aaPredicted RBP16.93■□□□□ 0.3
SCLT1-205ENST00000503401 VPS28Q9UK41 221 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 MMP17Q9ULZ9 603 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 OR51B4Q9Y5P0 310 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 RAD54BQ9Y620 910 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 MUC6Q6W4X9 2439 aa16.93■□□□□ 0.3
SCLT1-205ENST00000503401 MACROD2A1Z1Q3 448 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 MOCS3O95396 460 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 PTMAP06454 111 aaKnown RBP16.92■□□□□ 0.3
SCLT1-205ENST00000503401 HLA-EP13747 358 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 NTSR1P30989 418 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 CCR3P51677 355 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 CDH6P55285 790 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 KRT81Q14533 505 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 ANGPT1Q15389 498 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 FNDC3BQ53EP0 1204 aaKnown RBP16.92■□□□□ 0.3
SCLT1-205ENST00000503401 ZFYVE27Q5T4F4 411 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 RFX8Q6ZV50 586 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 SYT13Q7L8C5 426 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 RTL3Q8N8U3 475 aaKnown RBP16.92■□□□□ 0.3
SCLT1-205ENST00000503401 NETO2Q8NC67 525 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 KCNV2Q8TDN2 545 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 TTC17Q96AE7 1141 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 ACDQ96AP0 544 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 HHIPQ96QV1 700 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 IER2Q9BTL4 223 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 CATSPERBQ9H7T0 1116 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 PCDH18Q9HCL0 1135 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 ALG6Q9Y672 507 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 STON1Q9Y6Q2 735 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 CACNA1HO95180 2353 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 DAPK3O43293 454 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 TIMM44O43615 452 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 SPOPO43791 374 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 SNAP91O60641 907 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 ATP5BP06576 529 aaKnown RBP16.92■□□□□ 0.3
SCLT1-205ENST00000503401 DLDP09622 509 aaKnown RBP16.92■□□□□ 0.3
SCLT1-205ENST00000503401 COL9A1P20849 921 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 GLDCP23378 1020 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 PRKCHP24723 683 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 ACVRL1P37023 503 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 STK19P49842 368 aaPredicted RBP16.92■□□□□ 0.3
SCLT1-205ENST00000503401 CSTF1Q05048 431 aaKnown RBP16.92■□□□□ 0.3
SCLT1-205ENST00000503401 KIF5AQ12840 1032 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 MMRN1Q13201 1228 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 SLC12A1Q13621 1099 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 POLNQ7Z5Q5 900 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 PSMB7Q99436 277 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 SPON2Q9BUD6 331 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 PRMT8Q9NR22 394 aaPredicted RBP16.92■□□□□ 0.3
SCLT1-205ENST00000503401 RAPGEFL1Q9UHV5 662 aa16.92■□□□□ 0.3
SCLT1-205ENST00000503401 PLA2G4CQ9UP65 541 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms