RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 PHF13Q86YI8 300 aaPredicted RBP18.94■□□□□ 0.62
HOXD11-202ENST00000498438 ZNF683Q8IZ20 524 aa18.94■□□□□ 0.62
HOXD11-202ENST00000498438 OR52K2Q8NGK3 314 aa18.94■□□□□ 0.62
HOXD11-202ENST00000498438 JOSD2Q8TAC2 188 aa18.94■□□□□ 0.62
HOXD11-202ENST00000498438 RXFP2Q8WXD0 754 aa18.94■□□□□ 0.62
HOXD11-202ENST00000498438 BAP1Q92560 729 aa18.94■□□□□ 0.62
HOXD11-202ENST00000498438 FOXJ1Q92949 421 aa18.94■□□□□ 0.62
HOXD11-202ENST00000498438 RPL10LQ96L21 214 aaKnown RBP18.94■□□□□ 0.62
HOXD11-202ENST00000498438 NAP1L5Q96NT1 182 aaPredicted RBP18.94■□□□□ 0.62
HOXD11-202ENST00000498438 NUSAP1Q9BXS6 441 aaKnown RBP18.94■□□□□ 0.62
HOXD11-202ENST00000498438 CBX8Q9HC52 389 aa18.94■□□□□ 0.62
HOXD11-202ENST00000498438 SLCO3A1Q9UIG8 710 aa18.94■□□□□ 0.62
HOXD11-202ENST00000498438 DOCK4Q8N1I0 1966 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 MED19A0JLT2 244 aaPredicted RBP18.93■□□□□ 0.62
HOXD11-202ENST00000498438 C2CD4BA6NLJ0 364 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 MEI4A8MW99 385 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 CNTN5O94779 1100 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 DNTTP04053 509 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 CFIP05156 583 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 CALB1P05937 261 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 CCDC172P0C7W6 258 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 PTMSP20962 102 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 SDC4P31431 198 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 PLK1P53350 603 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 SULT2A1Q06520 285 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 C15orf59Q2T9L4 293 aaPredicted RBP18.93■□□□□ 0.62
HOXD11-202ENST00000498438 CCDC14Q49A88 953 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 RAB6CQ53S08 254 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 ALFQ53S48 1182 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 SLC23A3Q6PIS1 610 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 MON1BQ7L1V2 547 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 RGL4Q8IZJ4 473 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 ALG14Q96F25 216 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 NUP58Q9BVL2 599 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 RAB6CQ9H0N0 254 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 RSPH9Q9H1X1 276 aaPredicted RBP18.93■□□□□ 0.62
HOXD11-202ENST00000498438 MYO6Q9UM54 1294 aa18.93■□□□□ 0.62
HOXD11-202ENST00000498438 CACNA1EQ15878 2313 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 ADAMTS9Q9P2N4 1935 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 PCDH15Q96QU1 1955 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 EDDM13A0A1B0GTR0 161 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 A0A1W2PQC6 194 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 LRRC53A6NM62 1247 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 C4orf47A7E2U8 309 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 E9PAM4 449 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 ENDOD1O94919 500 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 SERPINC1P01008 464 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 ZBTB16Q05516 673 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 DUOXA1Q1HG43 343 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 TTC31Q49AM3 519 aaPredicted RBP18.92■□□□□ 0.62
HOXD11-202ENST00000498438 WDR45BQ5MNZ6 344 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 SYCP2LQ5T4T6 812 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 C9orf64Q5T6V5 341 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 ACBD5Q5T8D3 534 aaPredicted RBP18.92■□□□□ 0.62
HOXD11-202ENST00000498438 SH3PXD2AQ5TCZ1 1133 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 LRRC31Q6UY01 552 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 IRF2BP2Q7Z5L9 587 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 RABEPKQ7Z6M1 372 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 LUZP1Q86V48 1076 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 C3orf20Q8ND61 904 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 CADM4Q8NFZ8 388 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 CEP76Q8TAP6 659 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 C1orf74Q96LT6 269 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 HAPLN3Q96S86 360 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 FEM1AQ9BSK4 669 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 SELENOOQ9BVL4 669 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 TMEM9BQ9NQ34 198 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 MPP6Q9NZW5 540 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 VPS28Q9UK41 221 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 TBC1D30Q9Y2I9 924 aa18.92■□□□□ 0.62
HOXD11-202ENST00000498438 IGLV3-10A0A075B6K4 115 aa18.91■□□□□ 0.62
HOXD11-202ENST00000498438 TARSL2A2RTX5 802 aaKnown RBP18.91■□□□□ 0.62
HOXD11-202ENST00000498438 DRGXA6NNA5 263 aa18.91■□□□□ 0.62
HOXD11-202ENST00000498438 SERPINF2P08697 491 aa18.91■□□□□ 0.62
HOXD11-202ENST00000498438 KRT3P12035 628 aa18.91■□□□□ 0.62
HOXD11-202ENST00000498438 ACSL1P33121 698 aa18.91■□□□□ 0.62
HOXD11-202ENST00000498438 PTPN9P43378 593 aa18.91■□□□□ 0.62
HOXD11-202ENST00000498438 C1QBPQ07021 282 aaKnown RBP18.91■□□□□ 0.62
HOXD11-202ENST00000498438 TFAP2DQ7Z6R9 452 aa18.91■□□□□ 0.62
HOXD11-202ENST00000498438 PPP1R9BQ96SB3 815 aa18.91■□□□□ 0.62
HOXD11-202ENST00000498438 SYT11Q9BT88 431 aa18.91■□□□□ 0.62
HOXD11-202ENST00000498438 MUC3BQ9H195 1237 aa18.91■□□□□ 0.62
HOXD11-202ENST00000498438 PABPC3Q9H361 631 aaKnown RBP18.91■□□□□ 0.62
HOXD11-202ENST00000498438 CAPN10Q9HC96 672 aa18.91■□□□□ 0.62
HOXD11-202ENST00000498438 FSCN3Q9NQT6 498 aa18.91■□□□□ 0.62
HOXD11-202ENST00000498438 OR51B4Q9Y5P0 310 aa18.91■□□□□ 0.62
HOXD11-202ENST00000498438 ASCC3Q8N3C0 2202 aaKnown RBP18.9■□□□□ 0.62
HOXD11-202ENST00000498438 CDX4O14627 284 aaPredicted RBP18.9■□□□□ 0.62
HOXD11-202ENST00000498438 TM4SF5O14894 197 aa18.9■□□□□ 0.62
HOXD11-202ENST00000498438 RNASEH1O60930 286 aaKnown RBP18.9■□□□□ 0.62
HOXD11-202ENST00000498438 SRGAP2O75044 1071 aa18.9■□□□□ 0.62
HOXD11-202ENST00000498438 RHOCP08134 193 aa18.9■□□□□ 0.62
HOXD11-202ENST00000498438 ENGP17813 658 aa18.9■□□□□ 0.62
HOXD11-202ENST00000498438 MAOBP27338 520 aa18.9■□□□□ 0.62
HOXD11-202ENST00000498438 RFC1P35251 1148 aaPredicted RBP18.9■□□□□ 0.62
HOXD11-202ENST00000498438 NNMTP40261 264 aa18.9■□□□□ 0.62
HOXD11-202ENST00000498438 MAPK8P45983 427 aa18.9■□□□□ 0.62
HOXD11-202ENST00000498438 TPM4P67936 248 aa18.9■□□□□ 0.62
HOXD11-202ENST00000498438 ASIC2Q16515 512 aa18.9■□□□□ 0.62
HOXD11-202ENST00000498438 PPM1JQ5JR12 505 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms