RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 RSPH9Q9H1X1 276 aaPredicted RBP8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 SLC32A1Q9H598 525 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 WDCPQ9H6R7 721 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 NLRC4Q9NPP4 1024 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 FAM207AQ9NSI2 230 aaPredicted RBP8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 PIGVQ9NUD9 493 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 EIF2B4Q9UI10 523 aaKnown RBP8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 VANGL2Q9ULK5 521 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 SCML1Q9UN30 329 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 NCKAP1Q9Y2A7 1128 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 DAAM1Q9Y4D1 1078 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 HS3ST4Q9Y661 456 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 DOCK9Q9BZ29 2069 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 CACNA1EQ15878 2313 aa8.74□□□□□ -1.01
HMGXB4-207ENST00000498212 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 PCNX2A6NKB5 2137 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 TTC34A8MYJ7 566 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 UPK3BL1B0FP48 263 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 UPK3BL2E5RIL1 263 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 GOLGA8SH3BPF8 625 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 BCAT2O15382 392 aaPredicted RBP8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 PAGE1O75459 146 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 SEMA4FO95754 770 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 TFE3P19532 575 aaPredicted RBP8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 MZF1P28698 734 aaPredicted RBP8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 SOX5P35711 763 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 CXCR3P49682 368 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 NUMBP49757 651 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 STK19P49842 368 aaPredicted RBP8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 IRAK1P51617 712 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 PLK1P53350 603 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 COPB1P53618 953 aaKnown RBP8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 JAM2P57087 298 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 ZNF252P-AS1Q0IIN9 211 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 SFSWAPQ12872 951 aaKnown RBP8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 GRIK2Q13002 908 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 SEMA3BQ13214 749 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 ZNF177Q13360 481 aaPredicted RBP8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 CST6Q15828 149 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 SLC25A52Q3SY17 297 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 C2CD6Q53TS8 623 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 CCDC183Q5T5S1 534 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 C9orf64Q5T6V5 341 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 NAA35Q5VZE5 725 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 CXorf57Q6NSI4 855 aaKnown RBP8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 USP30Q70CQ3 517 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 DEFB124Q8NES8 71 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 OR2I1PQ8NGU4 316 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 GANCQ8TET4 914 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 SLC20A1Q8WUM9 679 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 CPA5Q8WXQ8 436 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 PTPRN2Q92932 1015 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 NT5C3BQ969T7 300 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 PCMTD1Q96MG8 357 aaPredicted RBP8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 SPAG5Q96R06 1193 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 TBCBQ99426 244 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 ZDHHC5Q9C0B5 715 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 SIK2Q9H0K1 926 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 PABPC3Q9H361 631 aaKnown RBP8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 C6orf106Q9H6K1 298 aaPredicted RBP8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 SGK2Q9HBY8 427 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 DNAAF2Q9NVR5 837 aaKnown RBP8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 TMEM51Q9NW97 253 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 ARHGEF38Q9NXL2 777 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 LIMA1Q9UHB6 759 aaKnown RBP8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 SLCO3A1Q9UIG8 710 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 SLC25A13Q9UJS0 675 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 NOCTQ9UK39 431 aaKnown RBP8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 ANGPTL2Q9UKU9 493 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 SIK3Q9Y2K2 1263 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 PAXBP1Q9Y5B6 917 aa8.73□□□□□ -1.01
HMGXB4-207ENST00000498212 A0A1W2PP55 124 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 LGALS16A8MUM7 142 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 EPHB6O15197 1021 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 MID1O15344 667 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 CLDN11O75508 207 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 FSBPO95073 299 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 ADCY5O95622 1261 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 CYP1A1P04798 512 aaPredicted RBP8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 ZNF18P17022 549 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 CDK11BP21127 795 aaKnown RBP8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 FLT3P36888 993 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 STAT1P42224 750 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 CDH4P55283 916 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 SHC2P98077 582 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 FMO1Q01740 532 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 CDR2Q01850 454 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 SLC14A1Q13336 389 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 ELAVL3Q14576 367 aaKnown RBP8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 SYCP1Q15431 976 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 C5orf22Q49AR2 442 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 ACBD5Q5T8D3 534 aaPredicted RBP8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 TRNP1Q6NT89 227 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 LRSAM1Q6UWE0 723 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 ARCQ7LC44 396 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 C14orf80Q86SX3 495 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 PIP4P1Q86T03 277 aa8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 MMAAQ8IVH4 418 aaKnown RBP8.72□□□□□ -1.01
HMGXB4-207ENST00000498212 STK40Q8N2I9 435 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms