RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 C2CD4BA6NLJ0 364 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 FAM90A9PA6NNJ1 464 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 FAM90A5PA8MXJ8 464 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 PRYO14603 147 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 SYN3O14994 580 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 HNRNPRO43390 633 aaKnown RBP3.63□□□□□ -1.83
PSPC1-205ENST00000497722 ANP32CO43423 234 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 PLAUP00749 431 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 FAM90A15PP0C7V4 464 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 FAM90A14PP0C7W9 464 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 PSG1P11464 419 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 CPA1P15085 419 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 TGM2P21980 687 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 GSTM2P28161 218 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 CST5P28325 142 aaPredicted RBP3.63□□□□□ -1.83
PSPC1-205ENST00000497722 IDUAP35475 653 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 THBS3P49746 956 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 ARL4CP56559 192 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 ACTR2P61160 394 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 SHC2P98077 582 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 B4GALNT1Q00973 533 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 PPFIA1Q13136 1202 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 GAB1Q13480 694 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 GALNT3Q14435 633 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 RUSC1-AS1Q66K80 236 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 TANGO2Q6ICL3 276 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 LDHAL6AQ6ZMR3 332 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 ZNF793Q6ZN11 406 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 CYB5R4Q7L1T6 521 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 MEPCEQ7L2J0 689 aaKnown RBP3.63□□□□□ -1.83
PSPC1-205ENST00000497722 ANKRD13BQ86YJ7 626 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 RHPN2Q8IUC4 686 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 OR4N4Q8N0Y3 316 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 PELI3Q8N2H9 469 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 NKAPQ8N5F7 415 aaKnown RBP3.63□□□□□ -1.83
PSPC1-205ENST00000497722 MPLKIPQ8TAP9 179 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 STT3BQ8TCJ2 826 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 BCAS4Q8TDM0 211 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 THAP4Q8WY91 577 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 ZNF845Q96IR2 970 aaPredicted RBP3.63□□□□□ -1.83
PSPC1-205ENST00000497722 ADAD1Q96M93 576 aaKnown RBP3.63□□□□□ -1.83
PSPC1-205ENST00000497722 PYM1Q9BRP8 204 aaKnown RBP3.63□□□□□ -1.83
PSPC1-205ENST00000497722 ISCA1Q9BUE6 129 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 TRIM31Q9BZY9 425 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 CLPBQ9H078 707 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 NOD2Q9HC29 1040 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 KCNK9Q9NPC2 374 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 ITM2CQ9NQX7 267 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 SRP68Q9UHB9 627 aaKnown RBP3.63□□□□□ -1.83
PSPC1-205ENST00000497722 PCDHGB3Q9Y5G1 929 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 HS3ST3B1Q9Y662 390 aa3.63□□□□□ -1.83
PSPC1-205ENST00000497722 DHHO43323 396 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 TLX3O43711 291 aaPredicted RBP3.62□□□□□ -1.83
PSPC1-205ENST00000497722 UGDHO60701 494 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 CNTN5O94779 1100 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 ALPLP05186 524 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 TFEBP19484 476 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 RPS6KB1P23443 525 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 HOXA7P31268 230 aaPredicted RBP3.62□□□□□ -1.83
PSPC1-205ENST00000497722 ADD2P35612 726 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 ME1P48163 572 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 MCM2P49736 904 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 OAZ1P54368 228 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 SLC12A1Q13621 1099 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 ALKBH1Q13686 389 aaKnown RBP3.62□□□□□ -1.83
PSPC1-205ENST00000497722 TRIM60Q495X7 471 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 ARL13AQ5H913 290 aaPredicted RBP3.62□□□□□ -1.83
PSPC1-205ENST00000497722 C10orf76Q5T2E6 689 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 TTC22Q5TAA0 569 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 LRIG3Q6UXM1 1119 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 RBM44Q6ZP01 1051 aaKnown RBP3.62□□□□□ -1.83
PSPC1-205ENST00000497722 ANKS1BQ7Z6G8 1248 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 MOGAT3Q86VF5 341 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 LAS2Q8IYD9 372 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 MMP21Q8N119 569 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 VPS52Q8N1B4 723 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 CLEC4CQ8WTT0 213 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 PPM1EQ8WY54 764 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 ARRDC3Q96B67 414 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 MSI2Q96DH6 328 aaKnown RBP3.62□□□□□ -1.83
PSPC1-205ENST00000497722 TRMT61AQ96FX7 289 aaKnown RBP3.62□□□□□ -1.83
PSPC1-205ENST00000497722 COG8Q96MW5 612 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 ERVK-5Q9HDB9 667 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 POT1Q9NUX5 634 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 DERAQ9Y315 318 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 COPG1Q9Y678 874 aaKnown RBP3.62□□□□□ -1.83
PSPC1-205ENST00000497722 DGKBQ9Y6T7 804 aa3.62□□□□□ -1.83
PSPC1-205ENST00000497722 ZNF814B7Z6K7 855 aa3.61□□□□□ -1.83
PSPC1-205ENST00000497722 GRM8O00222 908 aa3.61□□□□□ -1.83
PSPC1-205ENST00000497722 MSI1O43347 362 aaKnown RBP3.61□□□□□ -1.83
PSPC1-205ENST00000497722 TFRCP02786 760 aaKnown RBP3.61□□□□□ -1.83
PSPC1-205ENST00000497722 CYP3A4P08684 503 aa3.61□□□□□ -1.83
PSPC1-205ENST00000497722 HSD3B1P14060 373 aa3.61□□□□□ -1.83
PSPC1-205ENST00000497722 TKTP29401 623 aaKnown RBP3.61□□□□□ -1.83
PSPC1-205ENST00000497722 FAM3BP58499 235 aaPredicted RBP3.61□□□□□ -1.83
PSPC1-205ENST00000497722 CDK18Q07002 472 aa3.61□□□□□ -1.83
PSPC1-205ENST00000497722 ANKRD1Q15327 319 aa3.61□□□□□ -1.83
PSPC1-205ENST00000497722 LRRC24Q50LG9 513 aa3.61□□□□□ -1.83
PSPC1-205ENST00000497722 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms