RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	MAGEE2	Q8TD90	523 aa	Predicted RBP	10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	ZNF669	Q96BR6	464 aa	Predicted RBP	10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	DHRS4	Q9BTZ2	278 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	MTMR12	Q9C0I1	747 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	MIR1-1HG	Q9H1L0	117 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	GIN1	Q9NXP7	522 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	RIMS3	Q9UJD0	308 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	TLK1	Q9UKI8	766 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	CDYL	Q9Y232	598 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	CORIN	Q9Y5Q5	1042 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	NRAP	Q86VF7	1730 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	APOC4-APOC2	K7ER74	178 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597		M0QYV0	167 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	POLRMT	O00411	1230 aa	Known RBP	10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	APOC2	P02655	101 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	LTF	P02788	710 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	TSPAN8	P19075	237 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	TKT	P29401	623 aa	Known RBP	10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	OLIG2	Q13516	323 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	ZNF829	Q3KNS6	432 aa	Predicted RBP	10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	HABP4	Q5JVS0	413 aa	Known RBP	10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	FAM219B	Q5XKK7	198 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	KCTD8	Q6ZWB6	473 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	ARC	Q7LC44	396 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	LARGE2	Q8N3Y3	721 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	LINC00116	Q8NCU8	138 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	TMEM161B	Q8NDZ6	487 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	OSBPL11	Q9BXB4	747 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	STN1	Q9H668	368 aa	Known RBP	10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	POPDC2	Q9HBU9	364 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	BTBD19	C9JJ37	291 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597		H3BNH8	94 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597		K7ERI5	159 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	B4GAT1	O43505	415 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	PARN	O95453	639 aa	Known RBP	10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	ITGB5	P18084	799 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	GRK2	P25098	689 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	ATIC	P31939	592 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	SERPINB9	P50453	376 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	PLK1	P53350	603 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	PMS2P3	Q13401	168 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	PCLAF	Q15004	111 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	NFIL3	Q16649	462 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	KIF19	Q2TAC6	998 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	SMUG1	Q53HV7	270 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	SLC27A3	Q5K4L6	730 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	PIWIL3	Q7Z3Z3	882 aa	Known RBP	10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	CLIP4	Q8N3C7	705 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	SEPHS2	Q99611	448 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	HNRNPAB	Q99729	332 aa	Known RBP	10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	CISH	Q9NSE2	258 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	COPG2	Q9UBF2	871 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	FAM32A	Q9Y421	112 aa	Known RBP	10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	HES2	Q9Y543	173 aa		10.84	□□□□□ -0.67
TRAPPC12-223	ENST00000497597	SLC15A5	A6NIM6	579 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SNN	O75324	88 aa	Predicted RBP	10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	NAT1	P18440	290 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	CCNA2	P20248	432 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	ARRB2	P32121	409 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	GTF2B	Q00403	316 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	CTBS	Q01459	385 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SWSAP1	Q6NVH7	229 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	GPR180	Q86V85	440 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PHF13	Q86YI8	300 aa	Predicted RBP	10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PLD6	Q8N2A8	252 aa	Known RBP	10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PBXIP1	Q96AQ6	731 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	VCPIP1	Q96JH7	1222 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PPP1R16B	Q96T49	567 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	NEURL2	Q9BR09	285 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	CDH19	Q9H159	772 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	POLR3F	Q9H1D9	316 aa	Predicted RBP	10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SLC27A5	Q9Y2P5	690 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	MRPL11	Q9Y3B7	192 aa	Known RBP	10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PTPRJ	Q12913	1337 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597		A0A096LPK6	155 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	KRBA1	A5PL33	1030 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	IQCA1L	A6NCM1	817 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	KPNA7	A9QM74	516 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	TCP10L2	B9ZVM9	353 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PTGES3L	E9PB15	166 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	KPNA4	O00629	521 aa	Predicted RBP	10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	APOL1	O14791	398 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	MYO1D	O94832	1006 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	MFN2	O95140	757 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	METTL18	O95568	372 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	DLGAP3	O95886	979 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	CST3	P01034	146 aa	Predicted RBP	10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SEPHS1	P49903	392 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	IRF9	Q00978	393 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PLIN5	Q00G26	463 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PFKP	Q01813	784 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	MYBPC2	Q14324	1141 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	TMEM130	Q8N3G9	435 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	FAM110B	Q8TC76	370 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	TFAP2B	Q92481	460 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	KCNN1	Q92952	543 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SPC25	Q9HBM1	224 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PLK2	Q9NYY3	685 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	MRPL42	Q9Y6G3	142 aa	Known RBP	10.83	□□□□□ -0.68

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