RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 FSCBQ5H9T9 825 aa11.8□□□□□ -0.52
HLA-B-254ENST00000497377 PITRM1Q5JRX3 1037 aa11.8□□□□□ -0.52
HLA-B-254ENST00000497377 SH3PXD2AQ5TCZ1 1133 aa11.8□□□□□ -0.52
HLA-B-254ENST00000497377 ANO7Q6IWH7 933 aa11.8□□□□□ -0.52
HLA-B-254ENST00000497377 SERPINA13PQ6UXR4 307 aa11.8□□□□□ -0.52
HLA-B-254ENST00000497377 SLFN11Q7Z7L1 901 aa11.8□□□□□ -0.52
HLA-B-254ENST00000497377 C14orf80Q86SX3 495 aa11.8□□□□□ -0.52
HLA-B-254ENST00000497377 SETD3Q86TU7 594 aaPredicted RBP11.8□□□□□ -0.52
HLA-B-254ENST00000497377 MRFAP1L1Q96HT8 127 aa11.8□□□□□ -0.52
HLA-B-254ENST00000497377 ACOX2Q99424 681 aa11.8□□□□□ -0.52
HLA-B-254ENST00000497377 PHOX2BQ99453 314 aa11.8□□□□□ -0.52
HLA-B-254ENST00000497377 DEF6Q9H4E7 631 aa11.8□□□□□ -0.52
HLA-B-254ENST00000497377 FBRSQ9HAH7 460 aa11.8□□□□□ -0.52
HLA-B-254ENST00000497377 ZDHHC4Q9NPG8 344 aa11.8□□□□□ -0.52
HLA-B-254ENST00000497377 POLR3BQ9NW08 1133 aaPredicted RBP11.8□□□□□ -0.52
HLA-B-254ENST00000497377 BCCIPQ9P287 314 aaKnown RBP eCLIP11.8□□□□□ -0.52
HLA-B-254ENST00000497377 OR12D3Q9UGF7 316 aa11.8□□□□□ -0.52
HLA-B-254ENST00000497377 TBC1D30Q9Y2I9 924 aa11.8□□□□□ -0.52
HLA-B-254ENST00000497377 CKAP5Q14008 2032 aa11.8□□□□□ -0.52
HLA-B-254ENST00000497377 PIEZO1Q92508 2521 aa11.8□□□□□ -0.52
HLA-B-254ENST00000497377 EML5Q05BV3 1969 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 TCRBV21S2A2A0A5A6 115 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 PRR23AA6NEV1 266 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 EIF3CLB5ME19 914 aaKnown RBP11.79□□□□□ -0.52
HLA-B-254ENST00000497377 C3orf80F5H4A9 247 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 AP5Z1O43299 807 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 RPP40O75818 363 aaKnown RBP11.79□□□□□ -0.52
HLA-B-254ENST00000497377 GGCXP38435 758 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 NNMTP40261 264 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 CSKP41240 450 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 IL12RB1P42701 662 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 WASP42768 502 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 PXNP49023 591 aaPredicted RBP11.79□□□□□ -0.52
HLA-B-254ENST00000497377 MRE11P49959 708 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 ZNF75DP51815 510 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 ECT2LQ008S8 904 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 SIM2Q14190 667 aaPredicted RBP11.79□□□□□ -0.52
HLA-B-254ENST00000497377 EFHC2Q5JST6 749 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 CCDC122Q5T0U0 273 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 C6orf118Q5T5N4 469 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 MANEALQ5VSG8 457 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 CXorf57Q6NSI4 855 aaKnown RBP11.79□□□□□ -0.52
HLA-B-254ENST00000497377 ZNF783Q6ZMS7 281 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 CEP68Q76N32 757 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 CIR1Q86X95 450 aaPredicted RBP11.79□□□□□ -0.52
HLA-B-254ENST00000497377 GAS2L3Q86XJ1 694 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 SUMF1Q8NBK3 374 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 MDGA1Q8NFP4 955 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 SORCS1Q8WY21 1168 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 SPACA7Q96KW9 195 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 EIF3CQ99613 913 aaKnown RBP11.79□□□□□ -0.52
HLA-B-254ENST00000497377 ZYG11BQ9C0D3 744 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 TMEM245Q9H330 911 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 CD248Q9HCU0 757 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 MYO1AQ9UBC5 1043 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 SUN2Q9UH99 717 aa11.79□□□□□ -0.52
HLA-B-254ENST00000497377 INTS6Q9UL03 887 aaKnown RBP11.79□□□□□ -0.52
HLA-B-254ENST00000497377 SMG5Q9UPR3 1016 aaKnown RBP11.79□□□□□ -0.52
HLA-B-254ENST00000497377 MUC22E2RYF6 1773 aaPredicted RBP11.79□□□□□ -0.52
HLA-B-254ENST00000497377 PLXND1Q9Y4D7 1925 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 SPAG17Q6Q759 2223 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 WASH3PC4AMC7 463 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 AKR1B10O60218 316 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 GFRA3O60609 400 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 SRGAP2O75044 1071 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 ZNF217O75362 1048 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 CYP1A2P05177 515 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 RHOCP08134 193 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 GABRG2P18507 467 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 PRKCHP24723 683 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 OR1E1P30953 314 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 L1CAMP32004 1257 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 HTR7P34969 479 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 ETFBP38117 255 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 IRAK1P51617 712 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 ADKP55263 362 aaKnown RBP11.78□□□□□ -0.52
HLA-B-254ENST00000497377 OGDHQ02218 1023 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 CAMK2GQ13555 558 aaPredicted RBP11.78□□□□□ -0.52
HLA-B-254ENST00000497377 PIGHQ14442 188 aaPredicted RBP11.78□□□□□ -0.52
HLA-B-254ENST00000497377 PTPRNQ16849 979 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 ASTE1Q2TB18 679 aaPredicted RBP11.78□□□□□ -0.52
HLA-B-254ENST00000497377 RNF219Q5W0B1 726 aaPredicted RBP11.78□□□□□ -0.52
HLA-B-254ENST00000497377 LAIR1Q6GTX8 287 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 SCYL2Q6P3W7 929 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 METTL3Q86U44 580 aaKnown RBP11.78□□□□□ -0.52
HLA-B-254ENST00000497377 PSTKQ8IV42 348 aaKnown RBP11.78□□□□□ -0.52
HLA-B-254ENST00000497377 CCDC185Q8N715 623 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 CYB5D2Q8WUJ1 264 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 HMGB4Q8WW32 186 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 TBC1D31Q96DN5 1066 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 CCDC42Q96M95 316 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 FEM1AQ9BSK4 669 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 THAP2Q9H0W7 228 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 TMPRSS4Q9NRS4 437 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 DONSONQ9NYP3 566 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 LCMT1Q9UIC8 334 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 FZD10Q9ULW2 581 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 NENFQ9UMX5 172 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 SNX10Q9Y5X0 201 aa11.78□□□□□ -0.52
HLA-B-254ENST00000497377 ILVBLA1L0T0 632 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms