RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 CC2D1BQ5T0F9 858 aaKnown RBP4.43□□□□□ -1.7
SMC4-225ENST00000497203 WDR78Q5VTH9 848 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 ZKSCAN2Q63HK3 967 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 GALNT4Q8N4A0 578 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 ASB2Q96Q27 587 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 CD180Q99467 661 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 SH2D3AQ9BRG2 576 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 PAIP1Q9H074 479 aaKnown RBP4.43□□□□□ -1.7
SMC4-225ENST00000497203 NUAK2Q9H093 628 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 TAOK3Q9H2K8 898 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 ERVK-5Q9HDB9 667 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 SMC4Q9NTJ3 1288 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 ARL8BQ9NVJ2 186 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 THAP1Q9NVV9 213 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 ASNSD1Q9NWL6 643 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 MTMR4Q9NYA4 1195 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 SLC25A13Q9UJS0 675 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 B3GNT3Q9Y2A9 372 aa4.43□□□□□ -1.7
SMC4-225ENST00000497203 B4E171 279 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 USP12O75317 370 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 TULP3O75386 442 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 CNTN5O94779 1100 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 KAT7O95251 611 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 SGPL1O95470 568 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 HOXB9P17482 250 aaPredicted RBP4.42□□□□□ -1.7
SMC4-225ENST00000497203 ATF7P17544 494 aaPredicted RBP4.42□□□□□ -1.7
SMC4-225ENST00000497203 TGM2P21980 687 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 PRKCHP24723 683 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 LMO1P25800 156 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 TSPAN7P41732 249 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 ZNF84P51523 738 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 NR1H2P55055 460 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 AWAT1Q58HT5 328 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 CEP78Q5JTW2 689 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 ACAD10Q6JQN1 1059 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 KIAA1324Q6UXG2 1013 aaKnown RBP4.42□□□□□ -1.7
SMC4-225ENST00000497203 PCGF5Q86SE9 256 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 UEVLDQ8IX04 471 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 RFFLQ8WZ73 363 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 NCSTNQ92542 709 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 KCNJ9Q92806 393 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 RRP36Q96EU6 259 aaKnown RBP4.42□□□□□ -1.7
SMC4-225ENST00000497203 C5orf34Q96MH7 638 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 GPR78Q96P69 363 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 ABHD14AQ9BUJ0 271 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 HERC2P3Q9BVR0 1158 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 TRIM31Q9BZY9 425 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 ARHGAP39Q9C0H5 1083 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 STN1Q9H668 368 aaKnown RBP4.42□□□□□ -1.7
SMC4-225ENST00000497203 SLC22A11Q9NSA0 550 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 ALKBH4Q9NXW9 302 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 KLQ9UEF7 1012 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 CD207Q9UJ71 328 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 HSF4Q9ULV5 492 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 EMSYQ7Z589 1322 aa4.42□□□□□ -1.7
SMC4-225ENST00000497203 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.41□□□□□ -1.7
SMC4-225ENST00000497203 DNAJC9-AS1A6NH13 148 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 NPIPB13A6NJU9 1138 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 NPIPB5A8MRT5 1133 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 NPIPB4C9JG80 1138 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 TMEM232C9JQI7 657 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 TSPAN4O14817 238 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 SYN3O14994 580 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 DHX16O60231 1041 aaKnown RBP4.41□□□□□ -1.7
SMC4-225ENST00000497203 CD4P01730 458 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 ALDOCP09972 364 aaKnown RBP4.41□□□□□ -1.7
SMC4-225ENST00000497203 CYP2A6P11509 494 aaPredicted RBP4.41□□□□□ -1.7
SMC4-225ENST00000497203 CYP4B1P13584 511 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 PKMP14618 531 aaKnown RBP4.41□□□□□ -1.7
SMC4-225ENST00000497203 PRPH2P23942 346 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 GSTM2P28161 218 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 EPHB2P29323 1055 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 MAN1A1P33908 653 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 RXRGP48443 463 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 ADPRHP54922 357 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 RPP30P78346 268 aaKnown RBP4.41□□□□□ -1.7
SMC4-225ENST00000497203 B4GALNT1Q00973 533 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 DMWDQ09019 674 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 CAMK1Q14012 370 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 SRSF7Q16629 238 aaKnown RBP eCLIP4.41□□□□□ -1.7
SMC4-225ENST00000497203 NFIL3Q16649 462 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 ANXA2RQ3ZCQ2 193 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 GXYLT1Q4G148 440 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 TMED8Q6PL24 325 aaPredicted RBP4.41□□□□□ -1.7
SMC4-225ENST00000497203 RANBP10Q6VN20 620 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 GALNT7Q86SF2 657 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 ARMC8Q8IUR7 673 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 ADGRF3Q8IZF5 1079 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 C8orf58Q8NAV2 365 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 ZCCHC10Q8TBK6 192 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 CELF1Q92879 486 aaKnown RBP4.41□□□□□ -1.7
SMC4-225ENST00000497203 ZUFSPQ96AP4 578 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 RNF125Q96EQ8 232 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 P2RY11Q96G91 374 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 C7orf26Q96N11 449 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 FUZQ9BT04 418 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 QTRT1Q9BXR0 403 aaKnown RBP4.41□□□□□ -1.7
SMC4-225ENST00000497203 AGXT2Q9BYV1 514 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 ACAD9Q9H845 621 aa4.41□□□□□ -1.7
SMC4-225ENST00000497203 PPP1R14DQ9NXH3 145 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms