RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 PENKP01210 267 aaPredicted RBP10.2□□□□□ -0.78
SRSF4-205ENST00000497015 ACADMP11310 421 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 CDK4P11802 303 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 TMPRSS3P57727 454 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 ORC1Q13415 861 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 CAMK2GQ13555 558 aaPredicted RBP10.2□□□□□ -0.78
SRSF4-205ENST00000497015 SGO2Q562F6 1265 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 SWT1Q5T5J6 900 aaKnown RBP10.2□□□□□ -0.78
SRSF4-205ENST00000497015 CLEC20AQ6ZU45 233 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 C11orf57Q6ZUT1 292 aaPredicted RBP10.2□□□□□ -0.78
SRSF4-205ENST00000497015 DEPDC4Q8N2C3 294 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 ZNF366Q8N895 744 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 ANKRD52Q8NB46 1076 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 ZNF248Q8NDW4 579 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 OR2T3Q8NH03 318 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 FAM174AQ8TBP5 190 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 HEXIM2Q96MH2 286 aaKnown RBP10.2□□□□□ -0.78
SRSF4-205ENST00000497015 SLC6A18Q96N87 628 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 SMOQ99835 787 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 FUCA2Q9BTY2 467 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 DUSP16Q9BY84 665 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 CAAP1Q9H8G2 361 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 NMUR1Q9HB89 426 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 KRT82Q9NSB4 513 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 SAMSN1Q9NSI8 373 aaKnown RBP10.2□□□□□ -0.78
SRSF4-205ENST00000497015 CLCA2Q9UQC9 943 aa10.2□□□□□ -0.78
SRSF4-205ENST00000497015 BOD1L1Q8NFC6 3051 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 A0A1W2PNU3 283 aaPredicted RBP10.19□□□□□ -0.78
SRSF4-205ENST00000497015 A0A1W2PR77 199 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 EFSO43281 561 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 DFNA5O60443 496 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 SYNCRIPO60506 623 aaKnown RBP10.19□□□□□ -0.78
SRSF4-205ENST00000497015 SEMA4FO95754 770 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 MT-CO3P00414 261 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 MPOP05164 745 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 ITGAVP06756 1048 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 EPHX1P07099 455 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 ZNF18P17022 549 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 PON1P27169 355 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 BCAT1P54687 386 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 RPS14P62263 151 aaKnown RBP10.19□□□□□ -0.78
SRSF4-205ENST00000497015 NFKB2Q00653 900 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 ARSIQ5FYB1 569 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 PPP1R26Q5T8A7 1209 aaPredicted RBP10.19□□□□□ -0.78
SRSF4-205ENST00000497015 SFMBT2Q5VUG0 894 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 TMEM270Q6UE05 265 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 LCLAT1Q6UWP7 414 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 KDM7AQ6ZMT4 941 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 CREBRFQ8IUR6 639 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 SCML4Q8N228 414 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 ZNF276Q8N554 614 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 C12orf29Q8N999 325 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 ELMO3Q96BJ8 720 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 TMEM245Q9H330 911 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 PLCB1Q9NQ66 1216 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.19□□□□□ -0.783e-6■■■■■ 28.8
SRSF4-205ENST00000497015 FAM49BQ9NUQ9 324 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 FANCLQ9NW38 375 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 HESX1Q9UBX0 185 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 LIMA1Q9UHB6 759 aaKnown RBP10.19□□□□□ -0.78
SRSF4-205ENST00000497015 METRNQ9UJH8 293 aa10.19□□□□□ -0.78
SRSF4-205ENST00000497015 PTPN13Q12923 2485 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 A0A1W2PPC4 97 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 XPO1O14980 1071 aaKnown RBP10.18□□□□□ -0.78
SRSF4-205ENST00000497015 NPC1O15118 1278 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 KLK10O43240 276 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 MED7O43513 233 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 STC2O76061 302 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 RECKO95980 971 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 SETSIPP0DME0 302 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 CCDC130P13994 396 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 RACK1P63244 317 aaKnown RBP10.18□□□□□ -0.78
SRSF4-205ENST00000497015 BST2Q10589 180 aaKnown RBP10.18□□□□□ -0.78
SRSF4-205ENST00000497015 LRMPQ12912 555 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 NCAPHQ15003 741 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 KRT31Q15323 416 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 CNGA2Q16280 664 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 PROX2Q3B8N5 592 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 LINC00303Q3SY05 128 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 ANO6Q4KMQ2 910 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 ZNF394Q53GI3 561 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 RAB41Q5JT25 222 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 FKBP15Q5T1M5 1219 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 LYPD8Q6UX82 237 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 GPRIN1Q7Z2K8 1008 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 CCDC186Q7Z3E2 898 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 PRICKLE2Q7Z3G6 844 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 SPATS2Q86XZ4 545 aaKnown RBP10.18□□□□□ -0.78
SRSF4-205ENST00000497015 ARHGEF19Q8IW93 802 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 DHX40Q8IX18 779 aaKnown RBP10.18□□□□□ -0.78
SRSF4-205ENST00000497015 SHC3Q92529 594 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 KREMEN1Q96MU8 473 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 ZNF578Q96N58 590 aaPredicted RBP10.18□□□□□ -0.78
SRSF4-205ENST00000497015 CDK5RAP1Q96SZ6 601 aaKnown RBP10.18□□□□□ -0.78
SRSF4-205ENST00000497015 BTBD1Q9H0C5 482 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 LHX5Q9H2C1 402 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 MTG2Q9H4K7 406 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 UBE2TQ9NPD8 197 aaPredicted RBP10.18□□□□□ -0.78
SRSF4-205ENST00000497015 ASCL3Q9NQ33 180 aa10.18□□□□□ -0.78
SRSF4-205ENST00000497015 CYLDQ9NQC7 956 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms