RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 GPR107Q5VW38 600 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 MBLAC2Q68D91 279 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 USP43Q70EL4 1123 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 CXorf38Q8TB03 319 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 COA7Q96BR5 231 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 ZNF486Q96H40 463 aaPredicted RBP9.26□□□□□ -0.93
HPS4-217ENST00000496385 HHIPL1Q96JK4 782 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 KREMEN1Q96MU8 473 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 FAM118BQ9BPY3 351 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 CPNE5Q9HCH3 593 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 HOMER2Q9NSB8 354 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 MTMR4Q9NYA4 1195 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 PSME2Q9UL46 239 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 RBMX2Q9Y388 322 aaKnown RBP9.26□□□□□ -0.93
HPS4-217ENST00000496385 TEX264Q9Y6I9 313 aa9.26□□□□□ -0.93
HPS4-217ENST00000496385 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.25□□□□□ -0.93
HPS4-217ENST00000496385 GOLGA8QA0A0J9YX86 632 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 C1orf232A0A0U1RR37 186 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 LOC100653049A0A140TA62 436 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 GOLGA8OA6NCC3 632 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 SYCE1LA8MT33 242 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 GOLGA8NF8WBI6 632 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 ACOX3O15254 700 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 STAM2O75886 525 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 KRT34O76011 436 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 ALX3O95076 343 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 CYP2C8P10632 490 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 XRCC1P18887 633 aaPredicted RBP9.25□□□□□ -0.93
HPS4-217ENST00000496385 NCF2P19878 526 aaPredicted RBP9.25□□□□□ -0.93
HPS4-217ENST00000496385 RCVRNP35243 200 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 THOP1P52888 689 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 NME5P56597 212 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 BACE1P56817 501 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 TAS2R40P59535 323 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 TRAF2Q12933 501 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 FASTKD1Q53R41 847 aaKnown RBP9.25□□□□□ -0.93
HPS4-217ENST00000496385 GALNT18Q6P9A2 607 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 TRIM72Q6ZMU5 477 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 DSELQ8IZU8 1212 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 TMCO5AQ8N6Q1 288 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 ANKFN1Q8N957 763 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 SNX31Q8N9S9 440 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 FAM47BQ8NA70 645 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 GRIN3AQ8TCU5 1115 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 FNIP1Q8TF40 1166 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 ZNF778Q96MU6 729 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 CDRT15Q96T59 188 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 SLC13A1Q9BZW2 595 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 ADAMTS10Q9H324 1103 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 R3HDMLQ9H3Y0 253 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 ZNF395Q9H8N7 513 aaPredicted RBP9.25□□□□□ -0.93
HPS4-217ENST00000496385 NANOGQ9H9S0 305 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 GDAP2Q9NXN4 497 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 IP6K2Q9UHH9 426 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 VPS51Q9UID3 782 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 COQ4Q9Y3A0 265 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 TRAF6Q9Y4K3 522 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 CDY2AQ9Y6F7 541 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 CDY1Q9Y6F8 540 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 NOP56O00567 594 aaKnown RBP9.25□□□□□ -0.93
HPS4-217ENST00000496385 ZNF195O14628 629 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 BANF1O75531 89 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 JRKO75564 520 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 CPNE6O95741 557 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 UBL4AP11441 157 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 CD247P20963 164 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 HARS2P49590 506 aaKnown RBP9.25□□□□□ -0.93
HPS4-217ENST00000496385 GTF2A2P52657 109 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 HK2P52789 917 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 TRAP1Q12931 704 aaKnown RBP9.25□□□□□ -0.93
HPS4-217ENST00000496385 PMS2P3Q13401 168 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 NRF1Q16656 503 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 TFDP3Q5H9I0 405 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 C4orf22Q6V702 233 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 SPOCD1Q6ZMY3 1216 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 GOLM1Q8NBJ4 401 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 ASB9Q96DX5 294 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 NRBF2Q96F24 287 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 VMP1Q96GC9 406 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 NACC1Q96RE7 527 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 STRA6Q9BX79 667 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 CPVLQ9H3G5 476 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 TMEM206Q9H813 350 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 MARCH7Q9H992 704 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 AS3MTQ9HBK9 375 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 XPO7Q9UIA9 1087 aaKnown RBP9.25□□□□□ -0.93
HPS4-217ENST00000496385 ZNFX1Q9P2E3 1918 aaKnown RBP9.25□□□□□ -0.93
HPS4-217ENST00000496385 PTPRFP10586 1907 aa9.25□□□□□ -0.93
HPS4-217ENST00000496385 CCDC195A0A1B0GUA6 201 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 LRRIQ4A6NIV6 560 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 GOLGA8SH3BPF8 625 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 TADA2AO75478 443 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 UGT2B4P06133 528 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 MAPTP10636 758 aaKnown RBP9.24□□□□□ -0.93
HPS4-217ENST00000496385 RALBP11234 206 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 KRT3P12035 628 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 CD58P19256 250 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 MZF1P28698 734 aaPredicted RBP9.24□□□□□ -0.93
HPS4-217ENST00000496385 HPCAL1P37235 193 aa9.24□□□□□ -0.93
HPS4-217ENST00000496385 CDH15P55291 814 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms