RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 KCTD19Q17RG1 926 aaPredicted RBP7.1□□□□□ -1.27
USP39-219ENST00000496047 RAB6CQ53S08 254 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 SPANXN3Q5MJ09 141 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 FAXCQ5TGI0 409 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 SYPL2Q5VXT5 272 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 ARMC3Q5W041 872 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 RWDD4Q6NW29 188 aaKnown RBP7.1□□□□□ -1.27
USP39-219ENST00000496047 LRRC8BQ6P9F7 803 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 ZNF449Q6P9G9 518 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 HFE2Q6ZVN8 426 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 GPRIN1Q7Z2K8 1008 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 MON1AQ86VX9 555 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 CEP57Q86XR8 500 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 PYROXD2Q8N2H3 581 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 DNAAF3Q8N9W5 541 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 PDZD8Q8NEN9 1154 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 OR10T2Q8NGX3 314 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 GDAP1Q8TB36 358 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 MDM1Q8TC05 714 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 ADAM32Q8TC27 787 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 SLC44A1Q8WWI5 657 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 SREK1Q8WXA9 508 aaKnown RBP7.1□□□□□ -1.27
USP39-219ENST00000496047 PPM1EQ8WY54 764 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 EDEM1Q92611 657 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 FBXO32Q969P5 355 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 MRRFQ96E11 262 aaKnown RBP7.1□□□□□ -1.27
USP39-219ENST00000496047 P2RY11Q96G91 374 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 APOPT1Q96IL0 206 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 SEC16BQ96JE7 1060 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 KCNK16Q96T55 309 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 EBNA1BP2Q99848 306 aaKnown RBP7.1□□□□□ -1.27
USP39-219ENST00000496047 PAAF1Q9BRP4 392 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 RAB6CQ9H0N0 254 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 PRDM12Q9H4Q4 367 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 RABEP2Q9H5N1 569 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 C10orf88Q9H8K7 445 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 LRRC40Q9H9A6 602 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 WDR6Q9NNW5 1121 aaKnown RBP7.1□□□□□ -1.27
USP39-219ENST00000496047 NSMCE4AQ9NXX6 385 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 KLHL14Q9P2G3 628 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 OR12D3Q9UGF7 316 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 SCML2Q9UQR0 700 aa7.1□□□□□ -1.27
USP39-219ENST00000496047 AAR2Q9Y312 384 aaKnown RBP7.1□□□□□ -1.27
USP39-219ENST00000496047 TRIOBPQ9H2D6 2365 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.09□□□□□ -1.27
USP39-219ENST00000496047 TCRBV7S3A2A0A539 114 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 TCRBV9S1A1TA0A576 114 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 ARHGAP42A6NI28 874 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 TCP11X1B4DZS4 312 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 COPEO14579 308 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 GDF9O60383 454 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 GPR37L1O60883 481 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 VAV1P15498 845 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 KRT4P19013 534 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 PAMP19021 973 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 DRD4P21917 467 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 YWHAQP27348 245 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 PSMB4P28070 264 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 ALDH3A1P30838 453 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 RFC2P35250 354 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 GEMP55040 296 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 GPX6P59796 221 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 NRG1Q02297 640 aaPredicted RBP7.09□□□□□ -1.27
USP39-219ENST00000496047 GALNT2Q10471 571 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 ILF2Q12905 390 aaKnown RBP7.09□□□□□ -1.27
USP39-219ENST00000496047 FOXC1Q12948 553 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 SEMA3BQ13214 749 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 SETDB1Q15047 1291 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 LRRC14Q15048 493 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 DBN1Q16643 649 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 CCDC142Q17RM4 750 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 PLEKHG4Q58EX7 1191 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 CLLU1OSQ5K130 101 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 FAM171A1Q5VUB5 890 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 OTUD1Q5VV17 481 aaPredicted RBP7.09□□□□□ -1.27
USP39-219ENST00000496047 MSANTD2Q6P1R3 559 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 FUT10Q6P4F1 479 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 RASSF3Q86WH2 238 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 FAM126BQ8IXS8 530 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 BBS5Q8N3I7 341 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 PPM1NQ8N819 430 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 ZNF296Q8WUU4 475 aaPredicted RBP7.09□□□□□ -1.27
USP39-219ENST00000496047 MAML1Q92585 1016 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 NDRG1Q92597 394 aaKnown RBP7.09□□□□□ -1.27
USP39-219ENST00000496047 TSNARE1Q96NA8 513 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 PKMYT1Q99640 499 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 RTP3Q9BQQ7 232 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 SIK2Q9H0K1 926 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 GBA3Q9H227 469 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 ALG2Q9H553 416 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 ARHGEF38Q9NXL2 777 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 EURLQ9NYK6 297 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 MID2Q9UJV3 735 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 TLR6Q9Y2C9 796 aa7.09□□□□□ -1.27
USP39-219ENST00000496047 USP15Q9Y4E8 981 aaPredicted RBP7.09□□□□□ -1.27
USP39-219ENST00000496047 PTPRSQ13332 1948 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 MAGEB16A2A368 324 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 TBKBP1A7MCY6 615 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 MYO1CO00159 1063 aa7.08□□□□□ -1.28
USP39-219ENST00000496047 DFFAO00273 331 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms