RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	PDZD4	Q76G19	769 aa	Predicted RBP	13.73	□□□□□ -0.21
SUPT20H-222	ENST00000495071	STRADA	Q7RTN6	431 aa		13.73	□□□□□ -0.21
SUPT20H-222	ENST00000495071	TP53INP2	Q8IXH6	220 aa		13.73	□□□□□ -0.21
SUPT20H-222	ENST00000495071	FCRL3	Q96P31	734 aa	Predicted RBP	13.73	□□□□□ -0.21
SUPT20H-222	ENST00000495071	OR52B2	Q96RD2	323 aa		13.73	□□□□□ -0.21
SUPT20H-222	ENST00000495071	RBBP8	Q99708	897 aa		13.73	□□□□□ -0.21
SUPT20H-222	ENST00000495071	EIF2B3	Q9NR50	452 aa	Known RBP	13.73	□□□□□ -0.21
SUPT20H-222	ENST00000495071	FZD10	Q9ULW2	581 aa		13.73	□□□□□ -0.21
SUPT20H-222	ENST00000495071	NME7	Q9Y5B8	376 aa		13.73	□□□□□ -0.21
SUPT20H-222	ENST00000495071	TPH1	P17752	444 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	MPP3	Q13368	585 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	LAMC2	Q13753	1193 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	FBXO47	Q5MNV8	452 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	MTHFD1L	Q6UB35	978 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	PIGZ	Q86VD9	579 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ADAM32	Q8TC27	787 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	URGCP	Q8TCY9	931 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	CENPI	Q92674	756 aa	Predicted RBP	13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	MFSD3	Q96ES6	412 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	MED10	Q9BTT4	135 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	IARS2	Q9NSE4	1012 aa	Known RBP	13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	STAP1	Q9ULZ2	295 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	PGM3	O95394	542 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	C2	P06681	752 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	THRA	P10827	490 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	EPHA3	P29320	983 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	FLOT2	Q14254	428 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	SLC25A52	Q3SY17	297 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	RNF111	Q6ZNA4	994 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	DEFB132	Q7Z7B7	95 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071		Q9H521	79 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	UBP1	Q9NZI7	540 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	UTRN	P46939	3433 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	MPST	P25325	297 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ALDH1A3	P47895	512 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	LIMK2	P53671	638 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	MRPS22	P82650	360 aa	Known RBP	13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	FOLH1	Q04609	750 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	DCAF4L1	Q3SXM0	396 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ARHGAP17	Q68EM7	881 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	PGM2L1	Q6PCE3	622 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	NAPRT	Q6XQN6	538 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	APPL2	Q8NEU8	664 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	PPP1R13L	Q8WUF5	828 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	CDRT15	Q96T59	188 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	NUF2	Q9BZD4	464 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071	TRIP11	Q15643	1979 aa		13.72	□□□□□ -0.21
SUPT20H-222	ENST00000495071		H3BRB1	525 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	CHRNG	P07510	517 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ART3	Q13508	389 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	CERCAM	Q5T4B2	595 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	SEL1L3	Q68CR1	1132 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ARMCX2	Q7L311	632 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	KY	Q8NBH2	561 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	SLC7A14	Q8TBB6	771 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	MAPK15	Q8TD08	544 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	USP13	Q92995	863 aa	Predicted RBP	13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	RTKN	Q9BST9	563 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	GATA5	Q9BWX5	397 aa	Predicted RBP	13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	EIF2A	Q9BY44	585 aa	Known RBP	13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	TUT1	Q9H6E5	874 aa	Known RBP	13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	DMAP1	Q9NPF5	467 aa	Predicted RBP	13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ETAA1	Q9NY74	926 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ASB14	A6NK59	587 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	FZD9	O00144	591 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	HUS1	O60921	280 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	LTF	P02788	710 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	AVPR1A	P37288	418 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	CHN2	P52757	468 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	PKNOX1	P55347	436 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	MSLN	Q13421	630 aa	Predicted RBP	13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ANKRD20A4	Q4UJ75	823 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	PPM1L	Q5SGD2	360 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	RARS2	Q5T160	578 aa	Known RBP	13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ZNF618	Q5T7W0	954 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	EPGN	Q6UW88	154 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	C16orf89	Q6UX73	402 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	KCNMB4	Q86W47	210 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	PSTK	Q8IV42	348 aa	Known RBP	13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	CCNYL1	Q8N7R7	359 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	CCDC28B	Q9BUN5	200 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	MID2	Q9UJV3	735 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	ADAM28	Q9UKQ2	775 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	PPP2R3B	Q9Y5P8	575 aa		13.71	□□□□□ -0.21
SUPT20H-222	ENST00000495071	PRKCG	P05129	697 aa		13.71	□□□□□ -0.22
SUPT20H-222	ENST00000495071	MPO	P05164	745 aa		13.71	□□□□□ -0.22
SUPT20H-222	ENST00000495071	TCN1	P20061	433 aa	Predicted RBP	13.71	□□□□□ -0.22
SUPT20H-222	ENST00000495071	PIK3R1	P27986	724 aa		13.71	□□□□□ -0.22
SUPT20H-222	ENST00000495071	GLUD2	P49448	558 aa		13.71	□□□□□ -0.22
SUPT20H-222	ENST00000495071	TPI1	P60174	286 aa		13.71	□□□□□ -0.22
SUPT20H-222	ENST00000495071	USP10	Q14694	798 aa	Known RBP	13.71	□□□□□ -0.22
SUPT20H-222	ENST00000495071	C9orf57	Q5W0N0	161 aa		13.71	□□□□□ -0.22
SUPT20H-222	ENST00000495071	LRRC52	Q8N7C0	313 aa		13.71	□□□□□ -0.22
SUPT20H-222	ENST00000495071	NMD3	Q96D46	503 aa	Known RBP	13.71	□□□□□ -0.22
SUPT20H-222	ENST00000495071	HSFY1	Q96LI6	401 aa		13.71	□□□□□ -0.22
SUPT20H-222	ENST00000495071	GPRC5D	Q9NZD1	345 aa		13.71	□□□□□ -0.22
SUPT20H-222	ENST00000495071	LCT	P09848	1927 aa		13.7	□□□□□ -0.22

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