RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 CYP1A2P05177 515 aa17.62■□□□□ 0.41
SNX17-209ENST00000494893 DLDP09622 509 aaKnown RBP17.62■□□□□ 0.41
SNX17-209ENST00000494893 POLR2EP19388 210 aaKnown RBP17.62■□□□□ 0.41
SNX17-209ENST00000494893 PSMA2P25787 234 aa17.62■□□□□ 0.41
SNX17-209ENST00000494893 CYLC1P35663 651 aaPredicted RBP17.62■□□□□ 0.41
SNX17-209ENST00000494893 PLK1P53350 603 aa17.62■□□□□ 0.41
SNX17-209ENST00000494893 SLC18A3Q16572 532 aa17.62■□□□□ 0.41
SNX17-209ENST00000494893 FNIP1Q8TF40 1166 aa17.62■□□□□ 0.41
SNX17-209ENST00000494893 HMGB4Q8WW32 186 aa17.62■□□□□ 0.41
SNX17-209ENST00000494893 NKD2Q969F2 451 aaPredicted RBP17.62■□□□□ 0.41
SNX17-209ENST00000494893 PEBP4Q96S96 227 aa17.62■□□□□ 0.41
SNX17-209ENST00000494893 MTG2Q9H4K7 406 aa17.62■□□□□ 0.41
SNX17-209ENST00000494893 POLMQ9NP87 494 aaPredicted RBP17.62■□□□□ 0.41
SNX17-209ENST00000494893 OR12D3Q9UGF7 316 aa17.62■□□□□ 0.41
SNX17-209ENST00000494893 FZD10Q9ULW2 581 aa17.62■□□□□ 0.41
SNX17-209ENST00000494893 SCINQ9Y6U3 715 aa17.62■□□□□ 0.41
SNX17-209ENST00000494893 GPR179Q6PRD1 2367 aa17.62■□□□□ 0.41
SNX17-209ENST00000494893 EML5Q05BV3 1969 aa17.62■□□□□ 0.41
SNX17-209ENST00000494893 WDR87Q6ZQQ6 2873 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 DCLK1O15075 740 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 NDUFA10O95299 355 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 NDUFV2P19404 249 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 SEMA3BQ13214 749 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 ARL13BQ3SXY8 428 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 ACBD5Q5T8D3 534 aaPredicted RBP17.61■□□□□ 0.41
SNX17-209ENST00000494893 DAB2IPQ5VWQ8 1189 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 SDE2Q6IQ49 451 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 SCYL2Q6P3W7 929 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 LRRC31Q6UY01 552 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 TFAP2DQ7Z6R9 452 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 SLFN11Q7Z7L1 901 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 ZSCAN30Q86W11 494 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 FRMD1Q8N878 549 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 GAB3Q8WWW8 586 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 BTBD6Q96KE9 485 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 PSMB7Q99436 277 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 FEM1AQ9BSK4 669 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 SEMA4AQ9H3S1 761 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 DEF6Q9H4E7 631 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 SPTLC3Q9NUV7 552 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 NDFIP2Q9NV92 336 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 GPATCH2LQ9NWQ4 482 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 PPARGC1AQ9UBK2 798 aaKnown RBP17.61■□□□□ 0.41
SNX17-209ENST00000494893 ERVW-1Q9UQF0 538 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 INVSQ9Y283 1065 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 FRYLO94915 3013 aa17.61■□□□□ 0.41
SNX17-209ENST00000494893 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.6■□□□□ 0.41
SNX17-209ENST00000494893 EIF3CLB5ME19 914 aaKnown RBP17.6■□□□□ 0.41
SNX17-209ENST00000494893 AKR1B10O60218 316 aa17.6■□□□□ 0.41
SNX17-209ENST00000494893 LRCH4O75427 683 aa17.6■□□□□ 0.41
SNX17-209ENST00000494893 LRIG2O94898 1065 aa17.6■□□□□ 0.41
SNX17-209ENST00000494893 LCA5LO95447 670 aa17.6■□□□□ 0.41
SNX17-209ENST00000494893 TCF4P15884 667 aa17.6■□□□□ 0.41
SNX17-209ENST00000494893 CNR2P34972 360 aa17.6■□□□□ 0.41
SNX17-209ENST00000494893 STK19P49842 368 aaPredicted RBP17.6■□□□□ 0.41
SNX17-209ENST00000494893 COPAP53621 1224 aa17.6■□□□□ 0.41
SNX17-209ENST00000494893 ZNF177Q13360 481 aaPredicted RBP17.6■□□□□ 0.41
SNX17-209ENST00000494893 SLC12A1Q13621 1099 aa17.6■□□□□ 0.41
SNX17-209ENST00000494893 CA9Q16790 459 aa17.6■□□□□ 0.41
SNX17-209ENST00000494893 FNDC3BQ53EP0 1204 aaKnown RBP17.6■□□□□ 0.41
SNX17-209ENST00000494893 SERPINA13PQ6UXR4 307 aa17.6■□□□□ 0.41
SNX17-209ENST00000494893 ALYREFQ86V81 257 aaKnown RBP17.6■□□□□ 0.41
SNX17-209ENST00000494893 NLRP14Q86W24 1093 aa17.6■□□□□ 0.41
SNX17-209ENST00000494893 CCDC117Q8IWD4 279 aaPredicted RBP17.6■□□□□ 0.41
SNX17-209ENST00000494893 KIAA1524Q8TCG1 905 aa17.6■□□□□ 0.41
SNX17-209ENST00000494893 EIF3CQ99613 913 aaKnown RBP17.6■□□□□ 0.41
SNX17-209ENST00000494893 ZYG11BQ9C0D3 744 aa17.6■□□□□ 0.41
SNX17-209ENST00000494893 MKRN2Q9H000 416 aaKnown RBP17.6■□□□□ 0.41
SNX17-209ENST00000494893 CD93Q9NPY3 652 aa17.6■□□□□ 0.41
SNX17-209ENST00000494893 SLCO3A1Q9UIG8 710 aa17.6■□□□□ 0.41
SNX17-209ENST00000494893 SMG5Q9UPR3 1016 aaKnown RBP17.6■□□□□ 0.41
SNX17-209ENST00000494893 A0A0D9SEW6 157 aa17.59■□□□□ 0.41
SNX17-209ENST00000494893 RPP40O75818 363 aaKnown RBP17.59■□□□□ 0.41
SNX17-209ENST00000494893 ALDH1A2O94788 518 aa17.59■□□□□ 0.41
SNX17-209ENST00000494893 LMNAP02545 664 aaKnown RBP17.59■□□□□ 0.41
SNX17-209ENST00000494893 ASLP04424 464 aa17.59■□□□□ 0.41
SNX17-209ENST00000494893 ATP5BP06576 529 aaKnown RBP17.59■□□□□ 0.41
SNX17-209ENST00000494893 EPHX1P07099 455 aa17.59■□□□□ 0.41
SNX17-209ENST00000494893 MIPP30301 263 aa17.59■□□□□ 0.41
SNX17-209ENST00000494893 CAMK2GQ13555 558 aaPredicted RBP17.59■□□□□ 0.41
SNX17-209ENST00000494893 LPAL2Q16609 132 aa17.59■□□□□ 0.41
SNX17-209ENST00000494893 MAP7D1Q3KQU3 841 aa17.59■□□□□ 0.41
SNX17-209ENST00000494893 RNF219Q5W0B1 726 aaPredicted RBP17.59■□□□□ 0.41
SNX17-209ENST00000494893 CPNE8Q86YQ8 564 aa17.59■□□□□ 0.41
SNX17-209ENST00000494893 RLN3Q8WXF3 142 aa17.59■□□□□ 0.41
SNX17-209ENST00000494893 RPL10LQ96L21 214 aaKnown RBP17.59■□□□□ 0.41
SNX17-209ENST00000494893 MRGPRX1Q96LB2 322 aa17.59■□□□□ 0.41
SNX17-209ENST00000494893 NUP85Q9BW27 656 aa17.59■□□□□ 0.41
SNX17-209ENST00000494893 MRPL47Q9HD33 250 aaKnown RBP17.59■□□□□ 0.41
SNX17-209ENST00000494893 PLA2G4CQ9UP65 541 aa17.59■□□□□ 0.41
SNX17-209ENST00000494893 TTC34A8MYJ7 566 aa17.58■□□□□ 0.4
SNX17-209ENST00000494893 GFRA3O60609 400 aa17.58■□□□□ 0.4
SNX17-209ENST00000494893 RHOCP08134 193 aa17.58■□□□□ 0.4
SNX17-209ENST00000494893 C7P10643 843 aa17.58■□□□□ 0.4
SNX17-209ENST00000494893 BCKDHBP21953 392 aa17.58■□□□□ 0.4
SNX17-209ENST00000494893 IL1R2P27930 398 aa17.58■□□□□ 0.4
SNX17-209ENST00000494893 HOXD11P31277 338 aaPredicted RBP17.58■□□□□ 0.4
SNX17-209ENST00000494893 L1CAMP32004 1257 aa17.58■□□□□ 0.4
SNX17-209ENST00000494893 P2RY2P41231 377 aa17.58■□□□□ 0.4
SNX17-209ENST00000494893 ECT2LQ008S8 904 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms