RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 IL27RAQ6UWB1 636 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 ZSCAN30Q86W11 494 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 TMEM139Q8IV31 216 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 UBR7Q8N806 425 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 OR2T3Q8NH03 318 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 WFDC5Q8TCV5 224 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 CDC6Q99741 560 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 LHX5Q9H2C1 402 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 KCNF1Q9H3M0 494 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 CAAP1Q9H8G2 361 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 NHEJ1Q9H9Q4 299 aaPredicted RBP12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 EBF2Q9HAK2 575 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 MARCH2Q9P0N8 246 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 AJAP1Q9UKB5 411 aaPredicted RBP12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 KIAA1257Q9ULG3 409 aa12.19□□□□□ -0.46
CSNK1E-212ENST00000494610 MYLKQ15746 1914 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 A0A087WV48 116 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 GOLGA6L7A0A1B0GV03 622 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 FAM47DPA6NHR8 397 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 EIF3CLB5ME19 914 aaKnown RBP12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 RNF225M0QZC1 329 aaPredicted RBP12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 TNFSF14O43557 240 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 WNT1P04628 370 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 CCDC175P0C221 793 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 HOXD9P28356 352 aaPredicted RBP12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 GNA15P30679 374 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 EIF2S3P41091 472 aaKnown RBP12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 ZNF132P52740 706 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 ARID5AQ03989 594 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 CAMK2GQ13555 558 aaPredicted RBP12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 FNDC3BQ53EP0 1204 aaKnown RBP12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 WDR59Q6PJI9 974 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 CHST9Q7L1S5 443 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 BHLHA9Q7RTU4 235 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 ADIPOR2Q86V24 386 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 MSANTD4Q8NCY6 345 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 EPS8L1Q8TE68 723 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 UCMAQ8WVF2 138 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 KAT5Q92993 513 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 COL26A1Q96A83 441 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 SLC6A18Q96N87 628 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 EIF3CQ99613 913 aaKnown RBP12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 NT5C1AQ9BXI3 368 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 DUSP16Q9BY84 665 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 TSGA10Q9BZW7 698 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 TMEM245Q9H330 911 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 HAUS4Q9H6D7 363 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 PRSS16Q9NQE7 514 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 ABCB8Q9NUT2 735 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 ARHGAP20Q9P2F6 1191 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 DKK4Q9UBT3 224 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 SERGEFQ9UGK8 458 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 SFMBT1Q9UHJ3 866 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 PCDHGB2Q9Y5G2 931 aa12.18□□□□□ -0.46
CSNK1E-212ENST00000494610 SOWAHDA6NJG2 315 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 MSI1O43347 362 aaKnown RBP12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 NDUFA10O95299 355 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 SEMA4FO95754 770 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 IGHV4-34P06331 123 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 RALAP11233 206 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 CYP11B1P15538 503 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 TNFAIP3P21580 790 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 CD70P32970 193 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 CHKAP35790 457 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 EIF4A3P38919 411 aaKnown RBP12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 CTSKP43235 329 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 YWHAGP61981 247 aaKnown RBP eCLIP12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 CDR2Q01850 454 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 SEMG2Q02383 582 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 SHBQ15464 509 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 SLC18A3Q16572 532 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 E4F1Q66K89 784 aaPredicted RBP12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 HGSNATQ68CP4 663 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 IRF2BP2Q7Z5L9 587 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 PIGZQ86VD9 579 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 EDEM1Q92611 657 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 MYEOVQ96EZ4 313 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 HEXIM2Q96MH2 286 aaKnown RBP12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 PDCL3Q9H2J4 239 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 CLIC5Q9NZA1 410 aa12.17□□□□□ -0.46
CSNK1E-212ENST00000494610 LSM8O95777 96 aaKnown RBP12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 VDRP11473 427 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 GRK6P43250 576 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 ABCG1P45844 678 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 CCT8P50990 548 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 TKTL1P51854 596 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 COG7P83436 770 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 SGO2Q562F6 1265 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 RFWD3Q6PCD5 774 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 RSRC2Q7L4I2 434 aaKnown RBP12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 SCUBE3Q8IX30 993 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 FAM217AQ8IXS0 508 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 GALNT15Q8N3T1 639 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 CPXM2Q8N436 756 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 PDCD7Q8N8D1 485 aaKnown RBP12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 SLC4A11Q8NBS3 891 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 SLC39A7Q92504 469 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 IGSF8Q969P0 613 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 TRIM11Q96F44 468 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms