RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 VPS28Q9UK41 221 aa12.82□□□□□ -0.36
TRA2A-209ENST00000494255 MYO18AQ92614 2054 aaKnown RBP12.82□□□□□ -0.36
TRA2A-209ENST00000494255 ILVBLA1L0T0 632 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 SGK1O00141 431 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 FGF10O15520 208 aaPredicted RBP12.81□□□□□ -0.36
TRA2A-209ENST00000494255 HOXB2P14652 356 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 TCF4P15884 667 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 MZF1P28698 734 aaPredicted RBP12.81□□□□□ -0.36
TRA2A-209ENST00000494255 HOXC13P31276 330 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 ETFBP38117 255 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 ARL4AP40617 200 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 WASP42768 502 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 PLK1P53350 603 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 HADHBP55084 474 aaKnown RBP12.81□□□□□ -0.36
TRA2A-209ENST00000494255 ST8SIA6P61647 398 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 SLC25A11Q02978 314 aaKnown RBP12.81□□□□□ -0.36
TRA2A-209ENST00000494255 SEMA3BQ13214 749 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 ZNF234Q14588 700 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 GSE1Q14687 1217 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 CA9Q16790 459 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 SERPINA13PQ6UXR4 307 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 ZNF783Q6ZMS7 281 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 CYP4V2Q6ZWL3 525 aaPredicted RBP12.81□□□□□ -0.36
TRA2A-209ENST00000494255 APCDD1Q8J025 514 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 CYB5D2Q8WUJ1 264 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 TTC17Q96AE7 1141 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 CALR3Q96L12 384 aaKnown RBP12.81□□□□□ -0.36
TRA2A-209ENST00000494255 KCTD15Q96SI1 283 aaPredicted RBP12.81□□□□□ -0.36
TRA2A-209ENST00000494255 ACOX2Q99424 681 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 FEM1AQ9BSK4 669 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 IRF2BPLQ9H1B7 796 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 POLMQ9NP87 494 aaPredicted RBP12.81□□□□□ -0.36
TRA2A-209ENST00000494255 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRA2A-209ENST00000494255 TMEM248Q9NWD8 314 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 CACNA2D2Q9NY47 1150 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 INTS6Q9UL03 887 aaKnown RBP12.81□□□□□ -0.36
TRA2A-209ENST00000494255 HCN2Q9UL51 889 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 REXO2Q9Y3B8 237 aaKnown RBP12.81□□□□□ -0.36
TRA2A-209ENST00000494255 STON1Q9Y6Q2 735 aa12.81□□□□□ -0.36
TRA2A-209ENST00000494255 H3BRJ5 948 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 ZBTB24O43167 697 aaPredicted RBP12.8□□□□□ -0.36
TRA2A-209ENST00000494255 ARHGAP6O43182 974 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 KRT7P08729 469 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 RARAP10276 462 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 NNMTP40261 264 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 SLC1A1P43005 524 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 DGKEP52429 567 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 NRLP54845 237 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 NAP1L1P55209 391 aaKnown RBP12.8□□□□□ -0.36
TRA2A-209ENST00000494255 ECT2LQ008S8 904 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 KRT81Q14533 505 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 STARD3Q14849 445 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 KCNT1Q5JUK3 1230 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 ZFYVE27Q5T4F4 411 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 ARTNQ5T4W7 220 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 NLRP14Q86W24 1093 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 LRRC8AQ8IWT6 810 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 CAMKK1Q8N5S9 505 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 RTL3Q8N8U3 475 aaKnown RBP12.8□□□□□ -0.36
TRA2A-209ENST00000494255 TSTD1Q8NFU3 115 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 DESI2Q9BSY9 194 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 C2orf49Q9BVC5 232 aaPredicted RBP12.8□□□□□ -0.36
TRA2A-209ENST00000494255 C2orf42Q9NWW7 574 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 DNAI1Q9UI46 699 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 SLC25A13Q9UJS0 675 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 TFR2Q9UP52 801 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 NEU3Q9UQ49 428 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 ERVW-1Q9UQF0 538 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 BTNL10A8MVZ5 291 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 SPOPO43791 374 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 SYNCRIPO60506 623 aaKnown RBP12.8□□□□□ -0.36
TRA2A-209ENST00000494255 ADAM23O75077 832 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 ALDH1A2O94788 518 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 APBB3O95704 486 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 PTMAP06454 111 aaKnown RBP12.8□□□□□ -0.36
TRA2A-209ENST00000494255 SRPRAP08240 638 aaKnown RBP12.8□□□□□ -0.36
TRA2A-209ENST00000494255 IL12RB1P42701 662 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 HCAR3P49019 387 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 PTPN5P54829 565 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 GNA12Q03113 381 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 CRY1Q16526 586 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 DPYSL2Q16555 572 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 ZNF528Q3MIS6 628 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 TXNRD3NBQ6F5E7 133 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 RFX8Q6ZV50 586 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 MAML2Q8IZL2 1156 aaPredicted RBP12.8□□□□□ -0.36
TRA2A-209ENST00000494255 PRSS33Q8NF86 280 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 OR52K2Q8NGK3 314 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 HHIPQ96QV1 700 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 GABRG3Q99928 467 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 SPON2Q9BUD6 331 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 FAM126AQ9BYI3 521 aaPredicted RBP12.8□□□□□ -0.36
TRA2A-209ENST00000494255 POLR3BQ9NW08 1133 aaPredicted RBP12.8□□□□□ -0.36
TRA2A-209ENST00000494255 ZNF212Q9UDV6 495 aa12.8□□□□□ -0.36
TRA2A-209ENST00000494255 CACNA1IQ9P0X4 2223 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 RCCD1A6NED2 376 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 WASH4PA8MWX3 477 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 WASH3PC4AMC7 463 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 H0Y858 1186 aa12.79□□□□□ -0.36
TRA2A-209ENST00000494255 K7ESF4 209 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms