RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 PID1Q7Z2X4 250 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 DEFB128Q7Z7B8 93 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 TAX1BP1Q86VP1 789 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 SLC26A11Q86WA9 606 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 BANPQ8N9N5 519 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 GPR152Q8TDT2 470 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 SERAC1Q96JX3 654 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 TGS1Q96RS0 853 aaKnown RBP10.91□□□□□ -0.66
CLCN6-208ENST00000494028 VAT1Q99536 393 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 TTPALQ9BTX7 342 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 TTLL2Q9BWV7 592 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 OXCT2Q9BYC2 517 aaPredicted RBP10.91□□□□□ -0.66
CLCN6-208ENST00000494028 ZMYND15Q9H091 742 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 SIK2Q9H0K1 926 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 CATSPERBQ9H7T0 1116 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 UGT1A7Q9HAW7 530 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 UGT1A10Q9HAW8 530 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 UGT1A8Q9HAW9 530 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 CASS4Q9NQ75 786 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 OLA1Q9NTK5 396 aaKnown RBP10.91□□□□□ -0.66
CLCN6-208ENST00000494028 NDFIP2Q9NV92 336 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 FGFR1OP2Q9NVK5 253 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 TMEM51Q9NW97 253 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 PIH1D1Q9NWS0 290 aaKnown RBP10.91□□□□□ -0.66
CLCN6-208ENST00000494028 COMMD8Q9NX08 183 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 MKS1Q9NXB0 559 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 SLC17A6Q9P2U8 582 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 TRHDEQ9UKU6 1024 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 HELZP42694 1942 aaKnown RBP10.91□□□□□ -0.66
CLCN6-208ENST00000494028 DENND4CQ5VZ89 1909 aa10.91□□□□□ -0.66
CLCN6-208ENST00000494028 SLC38A8A6NNN8 435 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 ERI2A8K979 691 aaKnown RBP10.9□□□□□ -0.66
CLCN6-208ENST00000494028 TRIM49D1C9J1S8 452 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 DFFAO00273 331 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 CACNG3O60359 315 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 ALDH1A2O94788 518 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 ZWINTO95229 277 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 ALDH2P05091 517 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 ZDHHC11BP0C7U3 371 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 SRGAP2BP0DMP2 458 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 KRT4P19013 534 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 RPL10AP62906 217 aaKnown RBP10.9□□□□□ -0.66
CLCN6-208ENST00000494028 SLC18A2Q05940 514 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 EFEMP1Q12805 493 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 TAF10Q12962 218 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 NAB1Q13506 487 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 BMPR2Q13873 1038 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 ITIH4Q14624 930 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 PSMD5Q16401 504 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 PDK4Q16654 411 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 TEX44Q53QW1 395 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 MS4A13Q5J8X5 152 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 TTC39BQ5VTQ0 682 aaPredicted RBP10.9□□□□□ -0.66
CLCN6-208ENST00000494028 C1orf53Q5VUE5 145 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 SLC8B1Q6J4K2 584 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 SH2D5Q6ZV89 423 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 PIGWQ7Z7B1 504 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 CPLX4Q7Z7G2 160 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 LRRC6Q86X45 466 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 CTAGE3PQ8IX95 158 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 LZTR1Q8N653 840 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 CNTD1Q8N815 330 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 CCDC197Q8NCU1 140 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 OR52K1Q8NGK4 314 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 USP33Q8TEY7 942 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 ALKBH8Q96BT7 664 aaKnown RBP10.9□□□□□ -0.66
CLCN6-208ENST00000494028 OXNAD1Q96HP4 312 aaPredicted RBP10.9□□□□□ -0.66
CLCN6-208ENST00000494028 TEKT5Q96M29 485 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 TOX2Q96NM4 488 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 KLF6Q99612 283 aaPredicted RBP10.9□□□□□ -0.66
CLCN6-208ENST00000494028 IL12RB2Q99665 862 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 HERC2P3Q9BVR0 1158 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 SLC39A8Q9C0K1 460 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 NOL6Q9H6R4 1146 aaKnown RBP10.9□□□□□ -0.66
CLCN6-208ENST00000494028 RC3H2Q9HBD1 1191 aaKnown RBP10.9□□□□□ -0.66
CLCN6-208ENST00000494028 TLR8Q9NR97 1041 aaKnown RBP10.9□□□□□ -0.66
CLCN6-208ENST00000494028 MOCS1Q9NZB8 636 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 FNIP2Q9P278 1114 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 CDY1Q9Y6F8 540 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 MRPL42Q9Y6G3 142 aaKnown RBP10.9□□□□□ -0.66
CLCN6-208ENST00000494028 IKBKGQ9Y6K9 419 aa10.9□□□□□ -0.66
CLCN6-208ENST00000494028 IGLV3-10A0A075B6K4 115 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 ARHGAP42A6NI28 874 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 SDR42E2A6NKP2 422 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 GOLGA8RI6L899 631 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 TM9SF1O15321 606 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 SNX3O60493 162 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 MAFKO60675 156 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 USP12O75317 370 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 HLA-DQB2P05538 268 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 SLC2A3P11169 496 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 RHOQP17081 205 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 ADRA1DP25100 572 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 PSEN1P49768 467 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 CORO7P57737 925 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 SPRED3Q2MJR0 410 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 SPANXN3Q5MJ09 141 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 RASIP1Q5U651 963 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 NUGGCQ68CJ6 796 aa10.89□□□□□ -0.67
CLCN6-208ENST00000494028 LVRNQ6Q4G3 990 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms