RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 ALG14Q96F25 216 aa23.29■■□□□ 1.32
SNIP1-203ENST00000493916 DLL3Q9NYJ7 618 aa23.29■■□□□ 1.32
SNIP1-203ENST00000493916 TAS2R14Q9NYV8 317 aa23.29■■□□□ 1.32
SNIP1-203ENST00000493916 THADAQ6YHU6 1953 aa23.29■■□□□ 1.32
SNIP1-203ENST00000493916 CNTN5O94779 1100 aa23.28■■□□□ 1.32
SNIP1-203ENST00000493916 ACADMP11310 421 aa23.28■■□□□ 1.32
SNIP1-203ENST00000493916 CD6P30203 668 aa23.28■■□□□ 1.32
SNIP1-203ENST00000493916 OXTRP30559 389 aa23.28■■□□□ 1.32
SNIP1-203ENST00000493916 VASPP50552 380 aaPredicted RBP23.28■■□□□ 1.32
SNIP1-203ENST00000493916 ZBTB16Q05516 673 aa23.28■■□□□ 1.32
SNIP1-203ENST00000493916 KLHL30Q0D2K2 578 aa23.28■■□□□ 1.32
SNIP1-203ENST00000493916 ARL13BQ3SXY8 428 aa23.28■■□□□ 1.32
SNIP1-203ENST00000493916 RAB6CQ53S08 254 aa23.28■■□□□ 1.32
SNIP1-203ENST00000493916 ALFQ53S48 1182 aa23.28■■□□□ 1.32
SNIP1-203ENST00000493916 SH3PXD2AQ5TCZ1 1133 aa23.28■■□□□ 1.32
SNIP1-203ENST00000493916 PEAR1Q5VY43 1037 aaPredicted RBP23.28■■□□□ 1.32
SNIP1-203ENST00000493916 WDR59Q6PJI9 974 aa23.28■■□□□ 1.32
SNIP1-203ENST00000493916 C12orf50Q8NA57 414 aaPredicted RBP23.28■■□□□ 1.32
SNIP1-203ENST00000493916 OR52K2Q8NGK3 314 aa23.28■■□□□ 1.32
SNIP1-203ENST00000493916 NETO1Q8TDF5 533 aa23.28■■□□□ 1.32
SNIP1-203ENST00000493916 FAM172AQ8WUF8 416 aa23.28■■□□□ 1.32
SNIP1-203ENST00000493916 FEM1AQ9BSK4 669 aa23.28■■□□□ 1.32
SNIP1-203ENST00000493916 RAB6CQ9H0N0 254 aa23.28■■□□□ 1.32
SNIP1-203ENST00000493916 OR51B4Q9Y5P0 310 aa23.28■■□□□ 1.32
SNIP1-203ENST00000493916 ABCA7Q8IZY2 2146 aa23.27■■□□□ 1.32
SNIP1-203ENST00000493916 RRM1P23921 792 aa23.27■■□□□ 1.32
SNIP1-203ENST00000493916 ADRA1BP35368 520 aa23.27■■□□□ 1.32
SNIP1-203ENST00000493916 HOXD12P35452 270 aa23.27■■□□□ 1.32
SNIP1-203ENST00000493916 ZNF143P52747 638 aaPredicted RBP23.27■■□□□ 1.32
SNIP1-203ENST00000493916 HDAC4P56524 1084 aa23.27■■□□□ 1.32
SNIP1-203ENST00000493916 NRG1Q02297 640 aaPredicted RBP23.27■■□□□ 1.32
SNIP1-203ENST00000493916 AASDHQ4L235 1098 aaPredicted RBP23.27■■□□□ 1.32
SNIP1-203ENST00000493916 ARMCX6Q7L4S7 300 aa23.27■■□□□ 1.32
SNIP1-203ENST00000493916 SETD3Q86TU7 594 aaPredicted RBP23.27■■□□□ 1.32
SNIP1-203ENST00000493916 SYN2Q92777 582 aaPredicted RBP23.27■■□□□ 1.32
SNIP1-203ENST00000493916 MCEEQ96PE7 176 aa23.27■■□□□ 1.32
SNIP1-203ENST00000493916 RSPH9Q9H1X1 276 aaPredicted RBP23.27■■□□□ 1.32
SNIP1-203ENST00000493916 SMOC1Q9H4F8 434 aa23.27■■□□□ 1.32
SNIP1-203ENST00000493916 WSB2Q9NYS7 404 aaPredicted RBP23.27■■□□□ 1.32
SNIP1-203ENST00000493916 IFNKQ9P0W0 207 aa23.27■■□□□ 1.32
SNIP1-203ENST00000493916 PPARGC1AQ9UBK2 798 aaKnown RBP23.27■■□□□ 1.32
SNIP1-203ENST00000493916 CDV3Q9UKY7 258 aaKnown RBP23.27■■□□□ 1.32
SNIP1-203ENST00000493916 RALGAPA1Q6GYQ0 2036 aa23.26■■□□□ 1.31
SNIP1-203ENST00000493916 CEP250Q9BV73 2442 aa23.26■■□□□ 1.31
SNIP1-203ENST00000493916 EDDM13A0A1B0GTR0 161 aa23.26■■□□□ 1.31
SNIP1-203ENST00000493916 TARSL2A2RTX5 802 aaKnown RBP23.26■■□□□ 1.31
SNIP1-203ENST00000493916 ANKRD62A6NC57 917 aa23.26■■□□□ 1.31
SNIP1-203ENST00000493916 NDUFS2O75306 463 aa23.26■■□□□ 1.31
SNIP1-203ENST00000493916 GZMAP12544 262 aa23.26■■□□□ 1.31
SNIP1-203ENST00000493916 RPS14P62263 151 aaKnown RBP23.26■■□□□ 1.31
SNIP1-203ENST00000493916 PUM1Q14671 1186 aaKnown RBP eCLIP23.26■■□□□ 1.31
SNIP1-203ENST00000493916 C9orf64Q5T6V5 341 aa23.26■■□□□ 1.31
SNIP1-203ENST00000493916 ZNF776Q68DI1 518 aaPredicted RBP23.26■■□□□ 1.31
SNIP1-203ENST00000493916 CACUL1Q86Y37 369 aa23.26■■□□□ 1.31
SNIP1-203ENST00000493916 SYT12Q8IV01 421 aa23.26■■□□□ 1.31
SNIP1-203ENST00000493916 PIGKQ92643 395 aa23.26■■□□□ 1.31
SNIP1-203ENST00000493916 NTAN1Q96AB6 310 aa23.26■■□□□ 1.31
SNIP1-203ENST00000493916 TOE1Q96GM8 510 aaKnown RBP23.26■■□□□ 1.31
SNIP1-203ENST00000493916 ZNF419Q96HQ0 510 aaPredicted RBP23.26■■□□□ 1.31
SNIP1-203ENST00000493916 OSBPL2Q9H1P3 480 aa23.26■■□□□ 1.31
SNIP1-203ENST00000493916 MTG2Q9H4K7 406 aa23.26■■□□□ 1.31
SNIP1-203ENST00000493916 SLCO3A1Q9UIG8 710 aa23.26■■□□□ 1.31
SNIP1-203ENST00000493916 VPS28Q9UK41 221 aa23.26■■□□□ 1.31
SNIP1-203ENST00000493916 DNAH14Q0VDD8 3507 aa23.26■■□□□ 1.31
SNIP1-203ENST00000493916 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.25■■□□□ 1.31
SNIP1-203ENST00000493916 TTC34A8MYJ7 566 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 DDX3XO00571 662 aaKnown RBP eCLIP23.25■■□□□ 1.31
SNIP1-203ENST00000493916 SIN3BO75182 1162 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 RHOCP08134 193 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 NNMTP40261 264 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 STK19P49842 368 aaPredicted RBP23.25■■□□□ 1.31
SNIP1-203ENST00000493916 LIMK1P53667 647 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 RPL7AP62424 266 aaKnown RBP23.25■■□□□ 1.31
SNIP1-203ENST00000493916 ZNF33AQ06730 810 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 C6orf118Q5T5N4 469 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 MANEALQ5VSG8 457 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 TCEAL6Q6IPX3 200 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 LRSAM1Q6UWE0 723 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 SLC41A1Q8IVJ1 513 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 FOXJ1Q92949 421 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 TCEAL3Q969E4 200 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 RPL10LQ96L21 214 aaKnown RBP23.25■■□□□ 1.31
SNIP1-203ENST00000493916 ZYG11BQ9C0D3 744 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 MUC3BQ9H195 1237 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 TSPY26PQ9H489 355 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 MPP6Q9NZW5 540 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 ZNF212Q9UDV6 495 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 EVLQ9UI08 416 aaPredicted RBP23.25■■□□□ 1.31
SNIP1-203ENST00000493916 PILRBQ9UKJ0 227 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 CAPN11Q9UMQ6 739 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 NUP205Q92621 2012 aa23.25■■□□□ 1.31
SNIP1-203ENST00000493916 TMCO5BA8MYB1 307 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 CCP110O43303 1012 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 GDF9O60383 454 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 SRGAP2O75044 1071 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 TPM3P06753 285 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 ITPKAP23677 461 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 ZBED6P86452 979 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 SCAPQ12770 1279 aa23.24■■□□□ 1.31
SNIP1-203ENST00000493916 HGSNATQ68CP4 663 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms