RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 NOL6Q9H6R4 1146 aaKnown RBP19.89■□□□□ 0.77
USP39-218ENST00000493829 KCNK12Q9HB15 430 aa19.89■□□□□ 0.77
USP39-218ENST00000493829 RBM12Q9NTZ6 932 aaKnown RBP19.89■□□□□ 0.77
USP39-218ENST00000493829 RNF14Q9UBS8 474 aa19.89■□□□□ 0.77
USP39-218ENST00000493829 NYNRINQ9P2P1 1898 aaKnown RBP19.89■□□□□ 0.77
USP39-218ENST00000493829 WASH4PA8MWX3 477 aa19.88■□□□□ 0.77
USP39-218ENST00000493829 PENKP01210 267 aaPredicted RBP19.88■□□□□ 0.77
USP39-218ENST00000493829 MAPKAPK2P49137 400 aa19.88■□□□□ 0.77
USP39-218ENST00000493829 TUBB2AQ13885 445 aa19.88■□□□□ 0.77
USP39-218ENST00000493829 NOMO1Q15155 1222 aa19.88■□□□□ 0.77
USP39-218ENST00000493829 CXorf57Q6NSI4 855 aaKnown RBP19.88■□□□□ 0.77
USP39-218ENST00000493829 CCDC117Q8IWD4 279 aaPredicted RBP19.88■□□□□ 0.77
USP39-218ENST00000493829 ARHGAP12Q8IWW6 846 aa19.88■□□□□ 0.77
USP39-218ENST00000493829 KLHL7Q8IXQ5 586 aa19.88■□□□□ 0.77
USP39-218ENST00000493829 TUBB2BQ9BVA1 445 aa19.88■□□□□ 0.77
USP39-218ENST00000493829 SLC39A8Q9C0K1 460 aa19.88■□□□□ 0.77
USP39-218ENST00000493829 BRD9Q9H8M2 597 aa19.88■□□□□ 0.77
USP39-218ENST00000493829 COL6A3P12111 3177 aa19.88■□□□□ 0.77
USP39-218ENST00000493829 MCF2LO15068 1137 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 RAMP2O60895 175 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 ACVRL1P37023 503 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 EIF3EP60228 445 aaKnown RBP19.87■□□□□ 0.77
USP39-218ENST00000493829 FAM182AQ5T1J6 154 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 C6orf118Q5T5N4 469 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 RNF219Q5W0B1 726 aaPredicted RBP19.87■□□□□ 0.77
USP39-218ENST00000493829 ARHGAP36Q6ZRI8 547 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 C12orf40Q86WS4 652 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 PLCD3Q8N3E9 789 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 CPA6Q8N4T0 437 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 LRRN4CLQ8ND94 238 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 OR7D4Q8NG98 312 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 HMCESQ96FZ2 354 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 DDX47Q9H0S4 455 aaKnown RBP19.87■□□□□ 0.77
USP39-218ENST00000493829 MUC3BQ9H195 1237 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 ECT2Q9H8V3 914 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 DNPEPQ9ULA0 475 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 TICRRQ7Z2Z1 1910 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 A0A0D9SEW6 157 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 RASA4BC9J798 803 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 H7C0C1 242 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 CHADO15335 359 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 RASA4O43374 803 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 CSKP41240 450 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 ATP5OP48047 213 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 KIAA1958Q8N8K9 716 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 TTC13Q8NBP0 860 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 CCNYQ8ND76 341 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 SPATA4Q8NEY3 305 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 LGMNQ99538 433 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 L2HGDHQ9H9P8 463 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 MARK1Q9P0L2 795 aa19.87■□□□□ 0.77
USP39-218ENST00000493829 TRIM24O15164 1050 aa19.86■□□□□ 0.77
USP39-218ENST00000493829 LIASO43766 372 aa19.86■□□□□ 0.77
USP39-218ENST00000493829 PHF2O75151 1096 aa19.86■□□□□ 0.77
USP39-218ENST00000493829 MZF1P28698 734 aaPredicted RBP19.86■□□□□ 0.77
USP39-218ENST00000493829 CD70P32970 193 aa19.86■□□□□ 0.77
USP39-218ENST00000493829 PAPOLAP51003 745 aaKnown RBP19.86■□□□□ 0.77
USP39-218ENST00000493829 GNA12Q03113 381 aa19.86■□□□□ 0.77
USP39-218ENST00000493829 GAD2Q05329 585 aa19.86■□□□□ 0.77
USP39-218ENST00000493829 LMAN2Q12907 356 aa19.86■□□□□ 0.77
USP39-218ENST00000493829 RUNX3Q13761 415 aa19.86■□□□□ 0.77
USP39-218ENST00000493829 POLD3Q15054 466 aaPredicted RBP19.86■□□□□ 0.77
USP39-218ENST00000493829 MPP7Q5T2T1 576 aa19.86■□□□□ 0.77
USP39-218ENST00000493829 NAIF1Q69YI7 327 aaPredicted RBP19.86■□□□□ 0.77
USP39-218ENST00000493829 UMODL1-AS1Q8N2C9 162 aa19.86■□□□□ 0.77
USP39-218ENST00000493829 ATPAF2Q8N5M1 289 aa19.86■□□□□ 0.77
USP39-218ENST00000493829 MAGOHBQ96A72 148 aaKnown RBP19.86■□□□□ 0.77
USP39-218ENST00000493829 CCDC114Q96M63 670 aa19.86■□□□□ 0.77
USP39-218ENST00000493829 OLFM3Q96PB7 478 aa19.86■□□□□ 0.77
USP39-218ENST00000493829 SPON2Q9BUD6 331 aa19.86■□□□□ 0.77
USP39-218ENST00000493829 LRRC19Q9H756 370 aa19.86■□□□□ 0.77
USP39-218ENST00000493829 PRDM16Q9HAZ2 1276 aa19.86■□□□□ 0.77
USP39-218ENST00000493829 ABCB8Q9NUT2 735 aa19.86■□□□□ 0.77
USP39-218ENST00000493829 CTAGE15A4D2H0 777 aa19.85■□□□□ 0.77
USP39-218ENST00000493829 CTAGE8P0CG41 777 aa19.85■□□□□ 0.77
USP39-218ENST00000493829 KCNJ1P48048 391 aa19.85■□□□□ 0.77
USP39-218ENST00000493829 SOX9P48436 509 aa19.85■□□□□ 0.77
USP39-218ENST00000493829 MRPS25P82663 173 aaKnown RBP19.85■□□□□ 0.77
USP39-218ENST00000493829 GALNT2Q10471 571 aa19.85■□□□□ 0.77
USP39-218ENST00000493829 AP1B1Q10567 949 aa19.85■□□□□ 0.77
USP39-218ENST00000493829 AFMIDQ63HM1 303 aa19.85■□□□□ 0.77
USP39-218ENST00000493829 IL31Q6EBC2 164 aa19.85■□□□□ 0.77
USP39-218ENST00000493829 ASTLQ6HA08 431 aaPredicted RBP19.85■□□□□ 0.77
USP39-218ENST00000493829 TTC27Q6P3X3 843 aa19.85■□□□□ 0.77
USP39-218ENST00000493829 LEKR1Q6ZMV7 388 aa19.85■□□□□ 0.77
USP39-218ENST00000493829 CTAGE6Q86UF2 777 aa19.85■□□□□ 0.77
USP39-218ENST00000493829 CTAGE4Q8IX94 777 aa19.85■□□□□ 0.77
USP39-218ENST00000493829 LZTR1Q8N653 840 aa19.85■□□□□ 0.77
USP39-218ENST00000493829 DNAJC17Q9NVM6 304 aaKnown RBP19.85■□□□□ 0.77
USP39-218ENST00000493829 TBC1D30Q9Y2I9 924 aa19.85■□□□□ 0.77
USP39-218ENST00000493829 ARNTLO00327 626 aa19.84■□□□□ 0.77
USP39-218ENST00000493829 HOXC11O43248 304 aaPredicted RBP19.84■□□□□ 0.77
USP39-218ENST00000493829 RBP3P10745 1247 aa19.84■□□□□ 0.77
USP39-218ENST00000493829 NR2C2P49116 596 aa19.84■□□□□ 0.77
USP39-218ENST00000493829 NDST2P52849 883 aa19.84■□□□□ 0.77
USP39-218ENST00000493829 KDSRQ06136 332 aa19.84■□□□□ 0.77
USP39-218ENST00000493829 PDK1Q15118 436 aa19.84■□□□□ 0.77
USP39-218ENST00000493829 DARS2Q6PI48 645 aaKnown RBP19.84■□□□□ 0.77
USP39-218ENST00000493829 SETD3Q86TU7 594 aaPredicted RBP19.84■□□□□ 0.77
USP39-218ENST00000493829 SLC44A3Q8N4M1 653 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms