RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 KLF6Q99612 283 aaPredicted RBP11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 NMUR1Q9HB89 426 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 OLA1Q9NTK5 396 aaKnown RBP11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 SYBUQ9NX95 663 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 CLIC5Q9NZA1 410 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 USH1CQ9Y6N9 552 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 ARHGAP42A6NI28 874 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 H0YHG0 523 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 PARNO95453 639 aaKnown RBP11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 MTA1Q13330 715 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 GALNTL6Q49A17 601 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 ARMC3Q5W041 872 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 AFMIDQ63HM1 303 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 ATPAF2Q8N5M1 289 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 DBF4BQ8NFT6 615 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 RAB3IL1Q8TBN0 382 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 SPPL2BQ8TCT7 592 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 SLC39A13Q96H72 371 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 MANSC1Q9H8J5 431 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 LRFN2Q9ULH4 789 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 VANGL2Q9ULK5 521 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 AAR2Q9Y312 384 aaKnown RBP11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 PLLPQ9Y342 182 aa11.05□□□□□ -0.64
PHACTR4-204ENST00000493669 H7C4K7 107 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 USP1O94782 785 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 ALDH2P05091 517 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 NFKB1P19838 968 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 ALDH3A1P30838 453 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 CRHR1P34998 444 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 APLP1P51693 650 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 TMEM135Q86UB9 458 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 ARHGAP12Q8IWW6 846 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 RTL3Q8N8U3 475 aaKnown RBP11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 CCDC63Q8NA47 563 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 FATE1Q969F0 183 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 SPATA17Q96L03 361 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 IL22Q9GZX6 179 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 SIK2Q9H0K1 926 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 ABCF3Q9NUQ8 709 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 SFMBT1Q9UHJ3 866 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 MYO18AQ92614 2054 aaKnown RBP11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 TGDSO95455 350 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 SRGAP2BP0DMP2 458 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 TROVE2P10155 538 aaKnown RBP eCLIP11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 MLLT6P55198 1093 aaPredicted RBP11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 GPNMBQ14956 572 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 SPDYAQ5MJ70 313 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 FAM171A1Q5VUB5 890 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 PACS1Q6VY07 963 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 NPAS4Q8IUM7 802 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 CCDC117Q8IWD4 279 aaPredicted RBP11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 OR52K1Q8NGK4 314 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 CERS2Q96G23 380 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 CEP295NLQ96MC4 621 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 FAM111AQ96PZ2 611 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 IL12RB2Q99665 862 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 MLPHQ9BV36 600 aaPredicted RBP11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 MARCH5Q9NX47 278 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 SAGE1Q9NXZ1 904 aa11.04□□□□□ -0.64
PHACTR4-204ENST00000493669 VWA8A3KMH1 1905 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 FAM237BA0A1B0GVD1 139 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 F5H423 210 aaPredicted RBP11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 MATN3O15232 486 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 DCTN3O75935 186 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 ANXA9O76027 345 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 SKIV2L2P42285 1042 aaKnown RBP11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 SERPINB4P48594 390 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 GPR17Q13304 367 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 SPRED3Q2MJR0 410 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 ARTNQ5T4W7 220 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 OTOAQ7RTW8 1153 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 SPOCK2Q92563 424 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 AGAP3Q96P47 875 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 FCRL5Q96RD9 977 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 CPNE1Q99829 537 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 TRIM56Q9BRZ2 755 aaKnown RBP11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 SLCO1B3Q9NPD5 702 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 PPARGC1AQ9UBK2 798 aaKnown RBP11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 RPS6KL1Q9Y6S9 549 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 HMX2A2RU54 273 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 CFAP73A6NFT4 308 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 E9PAM4 449 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 MSI1O43347 362 aaKnown RBP11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 TBC1D4O60343 1298 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 UGT1A9O60656 530 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 JCHAINP01591 159 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 CCNB1P14635 433 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 YWHAQP27348 245 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 GP5P40197 560 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 CDH17Q12864 832 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 BNIP1Q12981 228 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 SETDB1Q15047 1291 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 DDR2Q16832 855 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 ANO4Q32M45 955 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 TTC31Q49AM3 519 aaPredicted RBP11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 GRTP1Q5TC63 336 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 FUT10Q6P4F1 479 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 KYAT3Q6YP21 454 aaKnown RBP11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 CRIPAKQ8N1N5 446 aa11.03□□□□□ -0.64
PHACTR4-204ENST00000493669 DNAAF3Q8N9W5 541 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms